KEGG   Erigeron canadensis (horseweed): 122604912
Entry
122604912         CDS       T07610                                 
Name
(RefSeq) UBP1-associated protein 2B-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122604912
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ecad03019]
    122604912
   03041 Spliceosome [BR:ecad03041]
    122604912
Messenger RNA biogenesis [BR:ecad03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     122604912
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     122604912
Spliceosome [BR:ecad03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    122604912
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-GeneID: 122604912
NCBI-ProteinID: XP_043633706
LinkDB
Position
6:complement(41158299..41166748)
AA seq 306 aa
MALPGFNVVSPLCIKGSPPLKKYGDIEEYTVVTDKVTGKAKGYGFVLFKNRKSASTSLKK
TQKKIGSRMATCQLASAGPGGPSNNQNTATQNTIGRKIFLANVGSHVNPNALRSYFAKFG
EIDEGPLGVDNATVKFKGFAMFVYKTAEGCKKALEEPNKVYDGCELQCKQAVDGQRGNKN
AKNLPPAMSDNEIGNLSYGYDGLYAPQLMNPGAGVMVGQNPMLVSALNQNTMSSTPQSYG
LSGSYGMNTVSPGMLAIYGSQLGLPGIGTYQTTQMGRSSSSTSDLATREHYGHESLASSF
SSYRGR
NT seq 921 nt   +upstreamnt  +downstreamnt
atggccctgcctggttttaacgtggtttcgccattgtgtatcaagggatctccaccctta
aaaaaatatggtgatatcgaagagtatacagttgttacggataaagtaaccgggaaggcc
aaaggctatggctttgttcttttcaagaaccgaaaaagtgcaagtacgtcccttaaaaag
acacaaaagaagataggaagccgcatggctacttgccagttagcttctgcaggacctggt
ggacctagtaacaaccagaacactgctacacaaaatactattggacgaaagatctttctt
gcaaatgttgggtcccatgtgaatcccaatgcacttaggtcctactttgccaagtttgga
gagattgacgaagggccattgggggttgacaatgctactgtaaaattcaaggggtttgcc
atgtttgtatacaagacagctgaagggtgcaagaaagctctagaagaacccaataaggta
tacgatggttgtgagttgcagtgcaaacaagctgttgatggccaacgtggaaataaaaat
gccaagaatctgccaccagctatgtctgataatgagattggaaatttgagttatggttat
gatggactgtatgctcctcagcttatgaatcctggagctggtgttatggttgggcaaaat
ccgatgttggtgtctgctttgaatcaaaacaccatgtcctcaacaccccaatcatacggg
ctcagtggtagttatggaatgaacacagtaagcccaggtatgctggccatttatggttct
caacttgggttaccaggtattgggacatatcagacgactcagatgggtcgctcttcatct
agcacatcagatctggcaactagggagcattatggacatgagtctttggcatccagtttt
tcttcatatcgtggccgctag

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