Erigeron canadensis (horseweed): 122605019
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Entry
122605019 CDS
T07610
Name
(RefSeq) serine/threonine-protein phosphatase PP1-like
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122605019
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ecad01009
]
122605019
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecad03021
]
122605019
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122605019
03041 Spliceosome [BR:
ecad03041
]
122605019
Enzymes [BR:
ecad01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
122605019
Protein phosphatases and associated proteins [BR:
ecad01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
122605019
Transcription machinery [BR:
ecad03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
122605019
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
122605019
Spliceosome [BR:
ecad03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
122605019
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
122605019
NCBI-ProteinID:
XP_043633817
LinkDB
All DBs
Position
6:complement(37825254..37827266)
Genome browser
AA seq
312 aa
AA seq
DB search
MEQSVVDDIIHRLLEVRGKASKQFQLIESEIKQLCVVSRDIFLQQPNLLELEAPIKICGD
IHGQYPDLLRLFEHDGLPPEADYLFLGDYVDRGKQSLETICLLLAYKIKYPNNIFLLRGN
HECSSINRVYGFYDECKRRFNVKLWKVFADCFNCLPISALISKRILCMHGGLSPELNSLD
QIREMIRPTDVPDAGLLCDLLWSDPHKDVKGWAMNERGVSFTFGADVVTEFLLKHDLDLI
CRAHQVVEDGYEFFAYKQLVTVFSAPNYCGEFDNAGAFISVDGDLVCSFRILKPPEKKAR
SKSMINLFGMSG
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggagcaatctgttgttgatgacataattcataggctgcttgaagtaagagggaaagca
agtaagcagtttcagctgattgaatcagagatcaagcaactttgtgttgtttctagagat
atcttcttgcaacagcctaacttgttggaacttgaagcccccatcaagatttgtggtgac
attcatggtcaataccctgaccttcttcgcctttttgagcacgatggattacctccagaa
gccgattacttatttcttggtgattatgttgacagaggcaaacaaagtcttgaaacaata
tgccttttgcttgcctataaaattaagtaccccaataacattttccttttgcgtggaaac
cacgaatgttcttctataaaccgtgtatatggtttctatgatgaatgcaaaaggcgattt
aatgttaagttatggaaggtgtttgcggattgtttcaattgcttgcctatatcagctctg
attagcaaaaggattttgtgtatgcatgggggcctctcacctgagctgaatagtttggat
caaattagagaaatgatccggcccactgatgtacctgatgccggtctgctttgtgatctt
ctttggtccgatccgcataaagatgtcaaagggtgggccatgaatgagcgaggggtgtcg
tttacatttggtgctgatgttgttacagagtttctactgaaacatgaccttgatcttatt
tgccgcgctcaccaggttgtagaagatgggtatgagttttttgcatacaaacaactggta
acggtgttttctgcacctaattattgtggggagtttgataatgctggggcatttatcagt
gttgatggcgacctagtgtgttcttttcgaatacttaaacccccagaaaagaaggcacgg
tccaagtctatgatcaatctttttgggatgtccggctaa
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