Erigeron canadensis (horseweed): 122605020
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Entry
122605020 CDS
T07610
Name
(RefSeq) zinc finger protein JACKDAW-like isoform X1
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecad03000
]
122605020
Transcription factors [BR:
ecad03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
122605020
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-C2H2_STOP2_C
zf-met
zf-C2H2_4
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
122605020
NCBI-ProteinID:
XP_043633821
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Position
6:37050262..37053081
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AA seq
518 aa
AA seq
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MMSGEMFPIPLQDYHHHHHLNSQQPPITTTTTTNDPNNPTPKPTSNFKKKRNLPGTPDPD
AEVMALSPKSLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRNTKEPIKKKVYI
CPEKTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTRE
YKCDCGTLFSRKDSFITHRAFCDALAEESVRLNSSVTPNNIGLKNEGMNESGMNPNFPQG
FCGMTQFGSGFRPDHFGDHQNNKPRLSLWLDQANSHHQLNNLNPMEQMNINNSNLYNMSS
SSAGLADMVNVFGSSSSSSPMANYSNSNQMPNLSLTPMAGESLKEETLASIYSMNQSHQT
ESSTGPMSATALLQKAAQMGSSRSNPSIFGTSFGLMNSSTTSNTAVSLVNNSNITSLPQL
QASSAMNINNTSSNSSPQAASNNADNQQMVMSRNETMAAPLKMMHHQSFSGVNNGMTRDF
LGMGAGEGGRPLLPQDLMKFASYGSSAMGSAMRQFASN
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgatgtccggtgagatgtttccaattcctcttcaagattatcatcatcatcatcatctt
aacagtcaacaaccaccaataactactactactactactaatgacccaaataaccctact
cctaaaccaacctctaatttcaagaagaaaagaaacttaccaggtaccccagatccagat
gcggaagtgatggctctatcaccaaaatcactaatggcgacaaatcgattcgtatgtgaa
atatgcaacaaaggattccaaagggaccaaaacctacaacttcatcgtagaggtcacaat
ctgccatggaagctaaagcaaaggaacacaaaagaacccatcaagaagaaagtctacatt
tgtcccgaaaaaacatgcgtccatcacgatccatctcgagcactcggagacctaaccgga
atcaagaaacactttagccggaaacacggtgaaaagaaatggaagtgcgaaaagtgttcc
aagaagtatgcagttcaatctgactggaaagctcattccaaaacttgtggtactagagag
tacaaatgtgactgtggcacccttttctccaggaaggatagtttcattacccatcgtgca
ttttgtgacgcgctggctgaagaaagcgtgaggctcaactcatcggtgacgccaaataac
atcggtttgaaaaacgaaggtatgaatgaatcaggaatgaacccgaatttccctcaaggg
ttttgtgggatgacacaatttgggtctgggtttaggcctgatcattttggtgatcatcaa
aataataagccaagattgtcactttggttagaccaagcgaattctcatcatcagctcaat
aatctcaatccaatggaacaaatgaatatcaacaactcgaatctttacaatatgtcatct
agctctgcaggtttagccgatatggttaatgtgtttggttcatcatcatcatcatctcct
atggcgaattattcaaactcgaaccaaatgccaaatttatcattaactccaatggccgga
gaaagtttaaaagaagaaaccctagcttcaatatattcaatgaaccaaagccatcaaacc
gaatcatccaccggtccaatgtctgcaaccgcactccttcaaaaagcggctcaaatgggc
tcaagcagaagcaacccctctatctttgggacaagtttcgggctcatgaactcttccacg
acatcaaacaccgcggttagtctagtaaacaacagcaatatcacgtctctacctcaactt
caagcctctagtgcaatgaacattaacaacacctcatcgaattcaagtcctcaagcggcg
agcaataatgctgacaaccaacaaatggttatgtcaagaaacgaaacaatggcggcgcca
ttgaagatgatgcaccaccagagctttagcggagtcaacaacggaatgacgagagacttc
ttggggatgggagcaggagaaggtgggcggccgttgttgccacaagatcttatgaagttt
gcatcttatggttcctcggccatgggatctgctatgagacaattcgctagtaattag
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