Erigeron canadensis (horseweed): 122605021
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Entry
122605021 CDS
T07610
Name
(RefSeq) DNA mismatch repair protein MLH3
KO
K08739
DNA mismatch repair protein MLH3
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
122605021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecad03400
]
122605021
DNA repair and recombination proteins [BR:
ecad03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
122605021
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
122605021
NCBI-ProteinID:
XP_043633823
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Position
6:28291579..28300588
Genome browser
AA seq
1339 aa
AA seq
DB search
MRSIKVLPESVRSCMRSGILLFDLTRVVEELVFNSLDAGATKVNVVVGVGSNYIKVTDNG
CGITRDGLVLLGERYATSKFEQLAGMNTVPESFGFRGEALSSISDVSLLEVVTKAHGMPN
GYRKVIKGCKCLYLGIDDDRQDVGTTVVVRDLFYNQPVKRRHIQSSPKKILHSVKECILR
IALVHLGTCFKVIDVESGDELLSLYPSPSPLPLLTTGFGVEVSWSLRKLDESDGKLKLSG
YISDPYEIFSVKAVQCFYINSRYISKGPIHKLLNQLAATHSCSHLLKADIGPQCGKRIRC
QASSTYILNLTCPRAQYDLSFEPAKTCATFKDWDLVVTFIKKAVSCFWGQDVLNSYGLPK
KRCVPRCDQNSTVLFPPQLEVSREEPKHMPHNKDSCNLTQQTALQSEDYGQDDFDYLLDN
SLKFSARFSDDKYLETKCSGELYDENTDHLSDATWNDNPLHTGCSKNNRLVVKKPSSVRF
NFDDDREINDNIIRSRRTALQSEDSGKKLDFDYRSDNLLEFSARSSEDIYLVTKCSGELS
DEDMDHLSDVKRNQNSHHTGCSTNNRLLVKKSSAVRFHFDDGEKSDVTKCSRRTSLQSKD
YGMELDFDYLPDNSLKFSDRTSADIYLETKCNGKLFDENMDHLSDAKSNQKTLYTGCRTN
NKLGVKKPSAVRFHFDDDRDNTDNIMKPFLRSCSSRMDVLPVFERPRGDDQFRFHADAKK
CLYVNNRVDNEEADCFIQCSKPWPKDDETVWSPPKNSSLLLEGSFGSDLTDVDSLVEDYG
HWTSPVASVKYSKSSHRSYNCNWSTIGEELLDEPLYDASTRHSKHCRDDGFDLFTNEEGQ
KDISNLDNMRYEYSWEDGSFLKGHVSHKKNIRNSQMDSFFPPQRCDVLSGTEWAHFPVAA
SHSASLLAYSDRGKSKLAHHRVQDKHQRRSCSAPPIYRGKRKFLALNNWMTVESGSFHHV
TLHDSPTLQEANHQKHIQKPSDIDHLALEEGSASDLLSKARLDKKKVVHKADISDYEVAA
THSLDVSNTNSDFTLEENQGALDLGGKWRNGCPLTSSIQKPHDLINQDNILDISSGLLHL
SDDSLLPKSMSKKCMEDCRVLQQVDRKFIPVVGGGILAIIDQHAADERIRLEDLREKVLS
GETKTITYLDAEQELVLPEIGYQFLSNYSEQIQKWGWICNFHSQSSMSFKKNLNFLHNQP
PGATLIAVPCILGVNLTDVDLLEFLQQLADTDGSSVIPPAVLRILNSKACRGAIMFGDAL
LPSECSLIVEELKQTSMCFQCAHGRPTTAPLVNLVVLHKQIAKLGNWSHGSSVLWHGLSR
HRPTLERVVQRLSSEGAEC
NT seq
4020 nt
NT seq
+upstream
nt +downstream
nt
atgaggagtatcaaggtattgccggaatctgttcgtagttgtatgcgatccgggattctt
ttgtttgacttgactagggttgtagaagagctggttttcaacagccttgatgctggtgcc
acgaaggtgaatgtggttgtcggcgttgggagtaactacattaaagttacagataatggg
tgtggtattactcgggatggattggtgttgttgggagaaagatacgcaacttccaaattt
gagcagctggctggtatgaacactgttccagaaagctttggctttcgtggggaagcatta
agctctatatctgatgtttctttgttggaagttgttaccaaggcacatggaatgcctaat
ggttaccggaaggttataaagggttgtaaatgcttgtatctaggaattgatgatgataga
caagatgtcggcacaaccgttgttgttcgcgatctgttttataaccaaccagttaaaagg
cggcatatacagtccagccccaaaaagattctacactctgtcaaggaatgcatactgaga
attgctcttgtccacctgggaacctgcttcaaagttatcgatgttgagagtggtgatgag
cttcttagcttgtatccttcgccttctcctttgcccctattgacgactggttttggagtt
gaggtttcttggtctttacgtaagttggatgaatctgatggcaaattaaagctctctgga
tacatttctgacccttatgaaatcttttctgtgaaggctgttcaatgtttttatatcaat
tcaagatatatatccaaagggccgatacataaattgctgaatcagttggctgcgacacat
agctgttcacatctgttaaaggcagacattggacctcaatgtggaaagcggattcggtgt
caggcatcttcaacctacatattgaacttaacttgcccacgagctcagtatgatttaagt
tttgaacccgcaaagacttgtgctacattcaaggattgggatcttgtagtaactttcatt
aagaaagctgtttcatgcttttggggtcaagacgtcctgaatagttatggacttccaaaa
aagaggtgcgtgccacgatgcgatcagaactctactgtcctcttcccgccccaactagag
gtgtctagagaagaaccaaagcatatgccacacaataaagattcatgcaacctcactcaa
caaactgctctacaatctgaagactatggacaagacgactttgactatctgcttgacaat
tcactaaagtttagtgccagattttcagatgataaatacttagagaccaagtgcagtggg
gagctgtatgatgaaaacacggaccatctttcagatgccacgtggaatgataaccctctg
catactggctgtagcaaaaacaacaggttagttgtgaagaagccatcttctgttcgtttt
aattttgatgatgatagagagatcaatgataatattatccgctctcgaagaactgctcta
cagtctgaagactctgggaaaaaattggactttgactatcggtctgacaacttgctagaa
ttcagtgccagatcatcagaagatatatatttagttaccaagtgtagtggggagctgtct
gatgaagatatggaccatctttcagatgttaagcggaatcaaaactctcatcataccggc
tgtagcacaaacaacagattacttgtgaaaaaatcatctgctgttcgctttcattttgat
gatggagagaagagtgacgttacaaagtgctctcgaagaacttctttacaatccaaagac
tatggaatggagttggactttgactatctgcctgacaattcattgaaatttagtgacaga
acttcagcagatatatatttagagaccaagtgtaatgggaagctgtttgatgaaaacatg
gatcatctttcagatgccaagtcaaatcagaaaactctgtatactggctgtagaacaaat
aacaaattaggtgtgaaaaaaccatctgctgttcgctttcattttgatgatgatagagat
aacactgacaatattatgaagccatttctgagaagttgctcctctcgcatggatgtgttg
cctgtctttgaaagaccaagaggtgatgatcagttcagatttcatgctgatgctaagaaa
tgtctctacgttaataatagagttgataatgaagaagctgattgttttattcagtgttct
aaaccatggcccaaagacgatgaaaccgtttggtcgcctcccaagaactcatcccttttg
ttagaagggtcatttggttcagatttgactgatgtagatagtttagttgaggattacggt
cattggaccagtccagttgcatcagttaaatattctaagtcaagccatcgatcttataat
tgtaattggtcaacgattggtgaagaattgcttgatgagcctttatatgatgcgtctaca
agacactccaaacattgcagagatgatggatttgacctttttacaaatgaagaaggccaa
aaggatatctccaacttagataacatgagatatgaatattcctgggaggatggctcattt
ctcaagggtcatgtgagtcacaaaaagaatattcggaactctcaaatggacagttttttt
cccccacaacgctgtgatgttctttccggaacagagtgggcgcattttcctgtagccgca
tcccactctgcatcattgttagcttattctgataggggaaagagcaaattagctcatcat
agagttcaggataagcatcagagaagaagctgctcagctcctccaatttacagagggaag
aggaagtttcttgccctaaataattggatgactgttgaatcggggagttttcatcacgtg
acactccatgattccccaacactgcaagaagctaatcatcagaagcacatccagaagcct
tcagatattgatcatttggcactggaggaaggttctgctagtgacttgctgtctaaggct
agacttgataagaagaaagttgttcataaagccgatatttcagattatgaagtggcggcc
acccattcccttgatgtatccaatacaaattcagactttactttagaggaaaatcaaggt
gcattagacctcggggggaaatggcggaatggctgtcctttgacatcaagcatacagaag
cctcatgaccttatcaatcaggacaatatactagacatatcttccgggctattgcatctc
tctgatgattctttgttacccaagtctatgagtaagaaatgcatggaggattgcagagtt
cttcaacaagttgacaggaaatttattcccgttgtgggtggtggtatactcgctattata
gaccaacatgctgctgatgagagaatacgccttgaagatttgagagagaaggtgctttct
ggagaaacgaagacaatcacttatctggatgcagagcaagaactggttttacctgagatt
gggtatcaatttctgagcaactattctgaacagatccagaaatggggttggatctgtaac
tttcattctcagagttcgatgtcctttaaaaagaacctgaattttttgcacaaccagcca
ccgggtgctacactcattgcagtgccgtgtattttgggtgtcaatttaactgatgtggat
cttctagagtttctgcaacagcttgctgatactgatggatcttcagtaataccaccagct
gttcttcggattctaaattctaaagcttgcaggggtgcaatcatgtttggagatgctcta
ctcccttcagaatgttctctaattgttgaagagcttaagcaaacttccatgtgttttcag
tgtgctcatggtcggccaactacagcacccctcgtgaatctagtggtcttgcataaacag
attgccaagcttggaaattggagccatggatcatctgtactgtggcatggactaagccgg
catagaccaactcttgagcgtgtcgttcaacgcttaagctcagaaggagcggaatgctag
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