Erigeron canadensis (horseweed): 122605058
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Entry
122605058 CDS
T07610
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 41
KO
K19466
ATP-dependent RNA helicase DDX59 [EC:
5.6.2.7
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
122605058
Enzymes [BR:
ecad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122605058
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GFIT
Motif
Pfam:
DEAD
Helicase_C
zf-HIT
ResIII
AAA_19
CMS1
Motif
Other DBs
NCBI-GeneID:
122605058
NCBI-ProteinID:
XP_043633867
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Position
6:complement(36080981..36083068)
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AA seq
532 aa
AA seq
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MENQTILTPQDSLQTSEDDVKTYSVQQREALPEEPRCVECGRYGEYICDETDDDICSLEC
KQKVLLKFKQPELQSSVVLPAVRLPATDECIYVRDGSNGKSEGHSLTNAQTELVRNKFEI
VVKGDCVPSPVLSFAHCDIPQKLLQNIERAGYEIPTPVQMQAIPAALKGQSLLVSAETGS
GKTAAYLVPVVSYCAKFRKEVGSDEKKPLVMVLTPTRELCIQVEEQAKVLGKGLPFKTAL
VVGGDAMPRQIHRIQGGIEMIVGTPGRLIDLLTKYDIELDRVSMLVIDEVDCMLQKGFRE
QVMQIYRALSQPQVLLYSATVPVEVEKMASSLAKEVIIITVGKLNEPNQAVKQVAIWVES
NRKKQKLFDILTSKQHFKPPVIVFVGSRIGADLLSEAITVTTGLKVLAIHGDKSMKERRD
IISSFLLGEIQVIVATGILGRGIDLLHVRQVIVFDMPNSIKEYVHQIGRASRMGKEGNSI
LFVNEENRSLFPELIGILKSSGAAIPREITNSRYLTASLPSNRGNRKRKANC
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggagaatcaaacaatactaacaccacaagattctctacaaacttcagaagatgatgtg
aaaacatatagtgttcaacaaagagaagctttacccgaagagcctcgatgcgtagaatgt
ggtcggtatggtgaatatatatgtgatgaaactgatgatgatatctgcagtcttgaatgt
aagcagaaagttttactaaaatttaaacaacccgagttgcagagtagtgttgttctgcct
gcagtgagactacctgcaacagatgagtgtatttatgttagagatggtagtaatggtaaa
tcagaggggcattctttaacgaatgcacagacggaattggttaggaataagtttgagatt
gttgtaaagggtgattgtgttcctagtccggttttatcttttgctcactgtgatattcct
cagaagctcttgcagaacattgaacgtgcaggatatgaaatcccgactcctgttcaaatg
caggcgattcctgctgcattgaagggtcaaagcctgcttgtttcagctgagactggttca
ggaaaaactgcggcgtatttggttcctgtagtttcgtactgtgcaaagtttagaaaggaa
gtgggttcagacgagaagaaaccattagtgatggtgctgacaccaactagggaactttgc
atacaggttgaggaacaagctaaggtgctcggaaaagggttgccgtttaaaacagcattg
gtggtgggtggtgatgcaatgcctagacagattcatcgcatacagggtggaatagaaatg
attgttggtacacctggcaggcttattgatcttttaaccaaatatgacattgagctagat
cgtgtctcgatgttagttatagatgaagtagattgcatgctccaaaagggcttccgcgaa
caggtaatgcagatttacagggctttatctcaacctcaagtcttgttgtattctgcgacg
gttccggttgaagtggagaagatggcaagttcactggcaaaagaagtcatcatcattact
gttggaaagctaaacgagccaaatcaggcggtgaaacaggtggctatatgggttgagtca
aaccgaaagaagcaaaagctttttgatatattgacaagcaaacagcatttcaagccaccc
gtcatagtgtttgtgggttcaagaataggagcagatctcctttctgaggcgataactgta
accacgggacttaaggttttggctattcatggagataagagcatgaaagaaagaagagat
attataagttcgtttttactaggagaaattcaggtgattgtcgcaaccgggatattgggc
agaggaattgatcttttgcatgtaagacaagttatcgtgtttgacatgccaaattcaatc
aaggagtatgttcatcagattggtagagcatccagaatgggaaaggagggtaattctatt
ctctttgttaatgaagagaacaggagtttgtttccggagttgattggaatcctgaaatct
tctggggctgctatacctcgggagatcactaactctaggtacttgacagcctcattacca
agcaacaggggaaacagaaaaagaaaagccaattgctaa
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