KEGG   Erigeron canadensis (horseweed): 122605068
Entry
122605068         CDS       T07610                                 
Name
(RefSeq) DNA-directed RNA polymerases II and IV subunit 5A-like
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad03020  RNA polymerase
ecad03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    122605068
  09124 Replication and repair
   03420 Nucleotide excision repair
    122605068
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ecad03021]
    122605068
   03400 DNA repair and recombination proteins [BR:ecad03400]
    122605068
Transcription machinery [BR:ecad03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     122605068
  RNA polymerase III system
   RNA polymerase III
     122605068
  RNA polymerase I system
   RNA polymerase I
     122605068
DNA repair and recombination proteins [BR:ecad03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      122605068
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N Mrr_cat OB_RNR_1st NA-iREase1
Other DBs
NCBI-GeneID: 122605068
NCBI-ProteinID: XP_043633877
LinkDB
Position
6:24267390..24270230
AA seq 208 aa
MSTALTEEEIKRLFRIRKTVMEMLKDRNYLVGDFELEMDKRQFVQKYGENMKREDIVISK
SLKNDSSEQIYVFFPEEAKVGVKTIKNYINRMKSENVTRGILVVQQNLTPFARTCISEIS
SKFHLEVFQEAELLVNVKNHVLVPEHQVLTNEEKKGLLERYTVKETQLPRIQVSDPVARY
YGLKRGQVVKIIRPSETAGRYVTYRYVV
NT seq 627 nt   +upstreamnt  +downstreamnt
atgtcgacggcgttaacggaagaagaaataaagagattgtttagaataaggaaaacagta
atggagatgttaaaagataggaattatttggttggtgattttgagcttgaaatggacaaa
cgacagtttgttcagaaatacggcgaaaatatgaaacgcgaagatatcgttatcagtaaa
tccttgaaaaacgattcctccgaacagatatatgtcttctttcccgaggaagcaaaagtc
ggagttaagaccattaagaactatattaaccgtatgaagtcagaaaatgttaccagagga
atcttggttgtgcagcaaaatctaactccctttgcccgaacttgcatcagtgagatatca
tcaaaatttcacttggaggtgttccaggaagcggagttgttggtgaatgtaaaaaatcat
gttttggtgcctgagcatcaagttcttacaaatgaagagaagaagggtttacttgagaga
tatactgttaaagaaacacagctacctcgtattcaagtgagtgatccagttgctaggtat
tatgggctaaaacgtgggcaggttgtgaaaattatccggcctagtgagactgctggtcgt
tatgtcacttaccgatatgttgtttga

DBGET integrated database retrieval system