Erigeron canadensis (horseweed): 122605079
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Entry
122605079 CDS
T07610
Name
(RefSeq) importin-5-like
KO
K20222
importin-5
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122605079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecad03009
]
122605079
Ribosome biogenesis [BR:
ecad03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
122605079
Pre-60S particles
122605079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
Importin_rep_6
Importin_rep_4
HEAT
HEAT_2
MMS19_C
Vac14_Fab1_bd
TOR1L1_N
HEAT_EF3_N
IFRD
ARM_ARMC5
Arm
Cnd1
Adaptin_N
HEAT_Maestro
CSTF2_hinge
Htt_N-HEAT_1
API5
Motif
Other DBs
NCBI-GeneID:
122605079
NCBI-ProteinID:
XP_043633893
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Position
6:complement(21971163..21977903)
Genome browser
AA seq
1132 aa
AA seq
DB search
MSSSGATNPTTHQLSQISSILNSDNNSQFETLISHLMSAANDQRSEAETLFNLSKQLHPD
NLVLKLSHLLHVSPHPEARAMCAVLLRRILTVSSSYDDASQQGGVGGLYTGLVSNTQVTL
KSILLECVIKETNKSIIKKLCDTISELSAIIMPENGWPELLPFMFQCVSSGNDIHRESAL
LIFAQLAQYIGELLIPHVETLHRVFLGCLGNGMIADVRIAALGASINFIQCLEKASDRDK
FHDLLPLMMQTLNEALVSGEEATAQEALELLIELAGTEPRFLRRSIVEVVGAMLQIAEAE
SFEEGTKHLALEFVVTLAEARERAPGMIRKLPQFVKRLFEVLMKMLLDVEDDPDWHGAQI
EHEDAGETSNYSAGQEYLDRLSISLGGNTIVPVISEIFPAYLAAPEWQKHHAALIALAQI
AEGCSKVMTKNLEQVVAMMLNSFQDPHPRARWAAINAIGQLSTDLGPDLQNQYHHLVLPA
LASAMDDFHNPRVQAHAASAVLNFSENCTPELLQPYLDGIVGKLLVLLQNPKQMVQEGAL
TALASVADSSQDHFQKYYDAVMPYLKAILVNANDKANRMLRAKSMECISLVGMAVGKDKF
KDDAKQVMDVLMALQGSQLETDDPTISYMLQAWARLCKCLGQDFLPYMNVVMPPLLHSAQ
LKPDVTITSADSDADIDESDDESIETITLGDKRIGIKTSVLEEKATACNMLCCYADELKE
GFFPWIDQVAPTLVPLLKFYFHEEVRKAAVSAMPELLRSAKLAVENGQSQGRNESYVKQL
SDYIIPALIEALHKEPETEICSSMLDAIKECIQICGPLLDENQVRSIVEELKQVMTASAA
RRNERAERIKAEDFDAEEGEMLKEENEQEEELFDQVGDCLGTLLKTFKAPFLPLFEELLP
YLMPMWGNGRTSEEKRIAICIFDDVVEHCRDAALKYYDTFLPLVLEACNDTSTDVRQAAV
YGVGLCAEFGGGAFKPFVVDALSRLDAVIRRPDALHPDNVMAYDNAVSALGKICQYHRDA
INAAQIVPAWLNCLPIKGDLIEAKVVHDQLCSMVERSDGELLGLNHQYLPKIVAVFADVL
SAGKDLASEQTVSRMINLLRQLQQTLPPSAMASTLSSLQPQQQLALQSILSS
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttccggcgccaccaatccaaccacccaccaactatcccaaatctcatcaatc
ctcaattccgacaacaattcccaattcgaaaccctaatctctcacttaatgtccgccgca
aacgaccaacgttcagaagccgaaacccttttcaacttatccaaacaacttcatcccgac
aacctcgtactcaaactttcccatttgttacatgtttccccacacccggaagcacgtgct
atgtgtgccgtcctgttgcgacgcatcctgaccgttagttcatcgtacgatgatgcgtcg
caacaaggcggcgttgggggattatatacaggtcttgtatctaatacccaagttacttta
aagtcaattttacttgaatgtgttattaaagaaacaaataaatctataattaaaaaatta
tgtgatactatttctgaattatctgctattataatgcccgaaaacggatggcccgaatta
ttgccttttatgtttcaatgtgttagttctggtaatgatatacatagggaaagtgctttg
ttgatatttgcacaattagcacaatatattggggaattgttgattccgcatgtagagacg
ttgcatcgtgtgtttttagggtgtttgggtaacggtatgattgcggatgttaggattgcg
gcgttgggtgcgtcgattaattttattcagtgtttagagaaggcgtcggatagggataag
tttcatgatttgcttccgttgatgatgcaaacgttgaacgaagcgttggtttctggggag
gaggcgacggcgcaagaagcgttggagttgttgattgagttggcggggacggagccgagg
tttttaaggaggagtattgttgaggttgttggagcgatgttgcaaattgcggaagctgaa
agttttgaagaagggactaagcatttggcgcttgagtttgttgttacgttggcggaagcg
agagagagggcgcctgggatgattaggaagctgccgcagtttgttaagaggttgtttgag
gttttgatgaagatgttgttggatgttgaagatgatcctgattggcatggtgctcagatt
gaacacgaggatgccggtgagactagtaattatagcgctggtcaagaatatctcgatagg
ttatcgatttctttaggtggaaatactattgttcctgttatttctgagatttttccggct
tatttggctgcacccgagtggcaaaagcatcatgcggcgcttattgctttagctcaaatc
gcagaaggttgctcaaaggttatgacaaagaacttggagcaagttgttgcgatgatgttg
aactcatttcaagatccccatcctcgagctagatgggcagctatcaatgcaattggtcaa
ctatctaccgaccttggcccagatttgcaaaatcagtatcaccatcttgtgcttccagct
ttagcttccgcaatggatgattttcataatccacgggtgcaagcacacgcagcttcggcg
gtgcttaacttcagcgaaaattgtacaccagaacttttacagccatatttggatgggatc
gtggggaaattacttgtattgttgcagaatcctaagcagatggttcaagagggggctttg
actgctttggcgtcggttgctgactcatctcaggaccattttcaaaagtattatgatgca
gtcatgccttacttaaaagccatactggtgaatgcaaatgacaaagctaatcgtatgctt
cgcgcaaaatctatggagtgtattagtttggttggcatggccgttggaaaagacaagttc
aaggatgatgctaagcaggttatggatgttcttatggccttgcaaggttctcaacttgag
acagatgatcctactataagctatatgttacaagcatgggcaaggctttgtaagtgccta
gggcaagatttccttccttacatgaatgttgtcatgccaccgttgcttcactccgctcaa
cttaaacctgatgttaccattacatctgctgattcagatgctgatattgacgaatctgat
gatgaaagcattgagactatcacacttggagataagaggatagggatcaagactagtgtc
cttgaggaaaaggctactgcctgcaacatgctctgttgctacgctgatgagttgaaggaa
ggatttttcccctggattgatcaggttgctccaactttagtaccactgttgaaattttat
tttcatgaagaagttaggaaggctgcagtttcagctatgccggagcttctccgatcagca
aaactagctgttgagaatggacaatctcagggacgcaatgaatcctatgtaaagcagttg
tctgactatatcattccagctttaatagaggctttacacaaggaacctgagactgaaatt
tgttcaagtatgctggatgctattaaagaatgtatacagatttgtgggcctctgttggat
gaaaaccaagttagaagcattgtcgaagagctaaagcaggttatgacagccagtgcagct
agaagaaatgaaagagccgagagaattaaagccgaggactttgatgcagaagagggggaa
atgctcaaggaagaaaatgagcaagaagaagaactttttgatcaagttggtgactgtttg
ggtaccctacttaagaccttcaaggctccatttctacctctttttgaagaactattacct
tatttgatgcctatgtggggcaatggtaggacatccgaggagaaaagaatagccatttgc
atatttgatgatgttgttgagcattgtcgagatgcagctttaaaatattatgataccttc
ctaccactcgtgttggaagcatgcaatgatacaagcactgatgtccgccaggctgctgtt
tatggggttggtttatgtgcggagtttggtggaggtgcattcaaaccatttgttgttgat
gccctttctagattagatgctgttataagacgccccgatgcattgcatccagataatgtt
atggcttatgacaatgctgtttcagctcttggcaagatatgccaatatcatcgtgatgct
attaatgctgcccagattgtccctgcatggttaaactgcttgccaataaaaggcgacttg
attgaggctaaagttgtccatgaccagctttgctctatggtggaaaggtcggatggagaa
ttattgggacttaaccatcagtatcttccaaagatagttgcagtatttgcagatgttctt
tctgctggtaaagatttggcctccgaacaaactgttagccgaatgattaatcttctgagg
cagctccagcaaacattacctccatctgctatggcatcaaccttatcatctctacaacct
caacagcagcttgcactacaatcaatcctctcttcttaa
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integrated database retrieval system
