Erigeron canadensis (horseweed): 122605086
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Entry
122605086 CDS
T07610
Name
(RefSeq) DNA gyrase subunit A, chloroplastic/mitochondrial
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ecad03032
]
122605086
03400 DNA repair and recombination proteins [BR:
ecad03400
]
122605086
Enzymes [BR:
ecad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
122605086
DNA replication proteins [BR:
ecad03032
]
Prokaryotic type
DNA Topoisomerases
122605086
DNA repair and recombination proteins [BR:
ecad03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
122605086
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-GeneID:
122605086
NCBI-ProteinID:
XP_043633899
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Position
6:23931421..23941647
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AA seq
946 aa
AA seq
DB search
MTPISLSVSNPSTQMSFTNGFRLFRCYNQLSSLPLSTFRLPNRLRSVNTLRFLSVTSNPS
SRVTTSVNSKPKEGLDDGGDGGNGGVVVIGGGGGGDGENRHGRIVLTELHKEATEAYMSY
AMSVLVGRALPDVRDGLKPVHRRILYALHELGLSSRKPHKKCARVVGEVLGKFHPHGDTA
VYDSLVRMAQDFSLRFPLVSGHGNFGSLDGDNPAAMRYTECRLEALAETMLLSDLDLDTV
DFVPNFDSSLKEPSLLPARIPNLLLNGASGIAVGMATNIPPHNLGELVDALSVLIHNPDV
TVQELLEYMPGPDFPTGGIIMGNLGILEAYRTGRGRVVVRGKVEIEVSDSKTKTAIVVKE
IPYQTNKSSLVMKIAELIQNKTLEGISDIRDESDRSGMRIVIELKRGSDPSIVLNNLYRF
TALQSGFSCNMVGILDGQPKLMGLKEMLQAFLDFRCTVIERRARFKLAHARDRYHVVEGI
IIGLDNIDDVIDVIRKATNNSMASADLRKRFDFSEKQAEAILDMNLRRLTSLERDKFISE
GKSLTEQISHLEELLSSKKQILQLIEQEASEIKSKFANPRRSTLEDTDHGTLDEIDVIPN
EEMLLALSEKGYVKRMKPDTFNLQHRGTIGKSVGKLRVNDTMSDFLFCRAHDHLLYFSDK
GIVYSARAYKIPECSRAAAGTPLIQILSSLSDGERITSIIPVSEFAEDQYLLMLTANGYV
KKVSLMYFSSIRSSGIIALQLVPGDSLKWVRHCTNDDYVAIASQNGMVILSSCGNIRALG
RNTRGAMAMRLKEGDRMACVDIIPAAKKDGIESVPGDRLTNKHTHGPWLLFVSENGFGKR
VPLSRFRQGQLNRVGLIGYKFSSKDCLAAVFVVGFTTADDGESDEQVVLVSQSGTVNRIK
VRDIPVQSRFARGVILMRLELAGKIQSASLISASETELEEVEAAVV
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgaccccaatttcactctcagtatcaaatccttcaactcaaatgtcattcaccaacgga
ttccgtttattccgctgctacaatcaactctcttctttacctctttccactttccgttta
cctaaccgtttacgttccgttaacactctccgttttctctccgttacttctaaccctagc
agccgtgttacgacgtcggtgaattcgaagccgaaagaaggtttggatgacggcggcgac
ggcgggaatggcggtgttgtagtcattggtggtggcggtggtggtgatggcgagaataga
catggaaggattgttcttactgagcttcataaggaagccaccgaagcttatatgtcttat
gctatgtcggttttagtcggacgtgctttgcccgatgttcgcgatgggttgaaaccggtt
catcgcaggattttgtatgcgttgcatgagttgggcctttcatcacgtaaaccccataag
aaatgtgccagagttgttggagaggtccttggtaagtttcacccgcatggtgatactgct
gtctatgattccttggttcgaatggcacaggatttttcattgcgtttcccacttgttagt
ggacacggaaatttcggttcactggatggagacaatcctgcagctatgcgatatacagaa
tgcagattagaagcacttgctgaaacaatgcttctatcagatttggatctggatacagtt
gattttgttccaaactttgatagttctcttaaagaaccatcattgcttcctgctaggatc
ccgaacttattattgaacggcgcttcagggatcgcggttggaatggcaaccaatattccg
ccacataatcttggggagttggttgatgctctatccgtgctaattcataatccagatgtc
acggtacaagaattgctagagtacatgcctggacctgactttcctacaggaggaatcata
atgggaaatcttggcattttggaggcttatcgaactggacggggacgtgtcgtagtcaga
ggaaaggtggagattgaagtatctgattccaaaacaaagacagcaattgtagtaaaagag
attccttaccaaaccaacaaatcctcccttgttatgaaaattgctgagctaattcaaaac
aagactttggaaggcattagtgatattcgcgatgagagtgatcgatctggaatgcggatt
gtcattgagcttaagagggggtctgacccatccattgttcttaataatttataccgcttc
actgctctacagtcaggttttagctgcaatatggttggtattcttgatgggcaacctaaa
ttgatgggcttaaaggaaatgcttcaggccttcttggattttagatgcacagtgattgaa
cggcgggcaaggtttaagcttgctcatgcacgtgacagatatcacgttgtcgagggtatc
ataattggactggataatattgacgatgtgattgatgtgatcagaaaagctacaaacaac
tcaatggcatctgctgacttgagaaaaagattcgatttttctgaaaaacaagctgaagca
atactagatatgaacttacggagactaacgtcgcttgagagagataagttcatcagtgaa
ggaaaatctttgactgaacagatttctcacttggaggaacttctatctagcaaaaagcaa
atattgcagctaattgaacaagaagcaagtgagataaagagtaagtttgccaatccacgg
cgttctactcttgaggatactgatcatggcacacttgatgaaatagatgtcattccaaat
gaagagatgttattggcacttagtgaaaaaggttatgtcaagaggatgaaacctgacact
ttcaatttacaacaccgtggaaccattggtaaatcagttggaaaactgagagtcaatgac
acaatgtctgactttcttttttgtcgtgcacatgaccatcttctgtatttcagtgacaag
ggcattgtatattctgctcgagcgtataagattccggaatgttctcgtgcagctgccggt
acaccattaatccagattttatcttctctgtcggatggtgaacgtattacatctataatt
cctgttagtgaatttgctgaagatcagtatcttttgatgctcactgcaaatggctacgtt
aaaaaagtatctttgatgtacttttcatctattagatcgtcggggataatagcacttcaa
ctggtacctggtgactcgctcaagtgggttcgccattgcacgaatgatgactatgttgca
attgcctcacaaaacggaatggttattcttagctcctgtgggaatatccgagcacttgga
agaaatactagaggggctatggcaatgagactgaaagaaggcgatcgaatggcatgtgtt
gatattatacctgcagcaaaaaaagatggaatagagagcgtgcctggagatcgcctcacc
aacaaacatactcatggcccatggctattgtttgtgtctgaaaatggttttggaaaaaga
gttcctctcagtcgctttcgccagggtcagttgaatagggtcggtttaatagggtacaag
ttttcatccaaagactgtctggctgctgtttttgtagttggttttactacagcagatgat
ggtgaaagtgatgaacaagttgttcttgtgagtcagagtggtacagtgaaccggataaaa
gtcagggatatccctgtacagtcaagatttgcaaggggggtgatactgatgcggcttgag
ctcgcgggaaagattcagtcagcttccttgatttcagcgtcagaaacagagctcgaggaa
gttgaagctgctgtcgtatag
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