Erigeron canadensis (horseweed): 122605128
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Entry
122605128 CDS
T07610
Name
(RefSeq) E3 ubiquitin-protein ligase UPL6 isoform X1
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122605128
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122605128
Enzymes [BR:
ecad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
122605128
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
HECT type E3
122605128
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
GATase_4
IQ
Motif
Other DBs
NCBI-GeneID:
122605128
NCBI-ProteinID:
XP_043633947
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Position
1:45506495..45518763
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AA seq
1040 aa
AA seq
DB search
MFFSGDPSNRKRVDLGGRSSKERDRKKLLEQTRLEREQRSWLRQQKAAALVIQKCFRGRV
AVKAERSKARERFYSTYGRNCERVGRHCFEPDSDFLQELLYFFSPRNASDLSILVKTCDF
ILKFEKDGGDVLKLFGTPDSSSKHALVSYRVKKLAYACIQAVHHNRYQFKGQLLSTSLDL
NAPTNILLKAAKLLMDQLPWGCKVVGYLLQQNIYRIFREIIVTGKMYFQTNKKKESSKPD
SHVRKGYLEMILELVIGHTRQGDCICPDIELQWSFTSQILTIPFVWQIFPSLKKIYVLQG
SCQHYLRKMATCTQSFDKVLPADISAEYPGYACLLGNLLEAVGVALANPACQRDMAIDFA
TIATLLLEVLPPIQSSTTESREENSIIGDDDMIIDDALAVVPLSKELEKQILKAIDPRFL
LQLTNVLFGGSSSVADSNKDKINDNEAAAVGAACSFLHMTFTTLPLEGIMTYLAYRMELV
SVLWNFMKRCDQNLSWSSLSAASRYLPGDAYGWLLPLAVFCPVYKHMLMIVDNEEFYEQE
RPLSLSDIRVLIGILRQALWQILWLNPVAPMEFSTNTVSIKKNRVEFVQYRVSVVASELL
SQLQDWNNRREFANPSIFHADGVNDHFISQAMIENTRAYDILKQAPFLVPFTSRVKLFTS
QLAAIKEGTGSHAMSNRSTFKIRRDRILEDAFNQLSTLADKDLRGVIRVTFVNEFGVEEA
GIDGGGIFKDFMENITRAAFDTQYGLFKETIDHLLYPNPGSGMIHEQHLQLFHFLGIILG
KAMFEGILVDIPFATFFLSKLKQKHNYLNDLPSLDPELYRHLIFLKHYEGDLAELELYFV
IVNNEFGEQTSEELVPGGKDIRVVNSNVIQFIHLVANHRLNTQIRQQSSYFLRGFQQLIQ
KDWIDMFNEHELQLLISGSVDNFDVDDLRSNTNYAGGYHREHYVIDMFWEILKNFSLENQ
HKFLKFVTGCSRGPLLGFKNLEPLFCIQRAAGSASEEALDRLPTSATCMNLLKLPPYRSK
EQMEQKLLYAINAEAGFDLS
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgttcttcagcggcgatccgtcgaaccgaaaacgagtagatttaggtgggcgtagttca
aaagaaagagatagaaagaagcttctggaacaaactaggttagaaagagagcaaagatca
tggctacgtcagcagaaagctgctgctcttgttattcagaaatgctttagaggaagagtg
gcggtgaaagcagagcgtagtaaggcacgagagcggttttattctacttatggaagaaac
tgtgaaagagtaggcaggcattgctttgaaccagattcagattttcttcaggaactgcta
tatttcttcagtccacggaacgcttcggacttgtccattcttgtgaagacatgcgatttt
attttgaagttcgaaaaagatggtggggatgttttgaagctctttggtaccccagattct
tcgtctaagcatgctcttgtgagttacagggttaagaaactagcttacgcctgtatccag
gctgtacatcataatagatatcagttcaagggccagcttttatcaacttctttggacttg
aacgccccgacgaatatcctgttgaaagcagcaaaattgttgatggatcagcttccgtgg
ggttgtaaggtagtcggctatcttttgcaacaaaacatatataggattttccgggagatc
attgtcacagggaagatgtactttcaaaccaacaagaagaaggaaagttctaaacccgac
agtcatgttagaaaagggtatttggagatgattcttgagctagtcattggacatactagg
caaggagattgtatatgcccagatatcgagctacaatggagtttcacttctcaaattcta
acaattccttttgtgtggcagatttttccttccctaaagaagatttatgttttgcaggga
tcatgtcagcattatctccgtaaaatggcgacatgtactcaaagttttgataaggtatta
cctgctgacatatcagctgaataccctggttatgcttgtcttcttggtaatctactagaa
gcggttggagttgctttggctaatcctgcatgtcaacgtgatatggccatagactttgct
acgattgcaacattgttgttggaagtacttcctcctatccaatcatcaactacagaaagt
agagaagaaaattcaataataggggacgacgatatgattatcgatgatgctctagcagta
gtacctctcagtaaggaattggaaaagcagattttaaaagctatagatccccgctttctt
ttgcaactgacaaatgttttgtttggaggctcttcgtctgtcgctgattcaaacaaagat
aaaataaatgataatgaagcagcagctgttggtgcagcttgctcttttcttcacatgact
tttaccactttgccccttgagggtatcatgacatatctagcgtatagaatggagttggta
tctgtactctggaatttcatgaaacgatgtgatcagaatttaagttggtcttccttgtct
gctgcatctcggtacctgcctggcgatgcatatggttggctgctacctttggcagttttc
tgccctgtttacaagcatatgcttatgatcgtggacaatgaagagttctatgagcaggaa
agaccattgtcactcagtgacattagagtattaattggtatcttgagacaggctctgtgg
cagatcctttggctaaatccagtggcaccaatggaattttctacaaatactgtttccata
aagaagaatcgtgtagaatttgttcaatatagggttagtgttgtggcttctgaacttctt
tctcagttgcaagattggaataatagaagggagtttgcaaatccaagtatctttcatgct
gatggtgtgaatgatcacttcatttcgcaggcaatgattgaaaacacaagggcatatgac
atactgaaacaagctccttttctggtgccatttactagcagagttaaattgttcacttca
cagcttgctgcgataaaggaaggaactgggtctcatgccatgtctaatagaagcactttt
aagataagacgagatcgtatactagaagatgcttttaatcagttgagcacattagcagac
aaggatcttcgtggagtgattcgggttacttttgtcaatgaatttggagtggaagaggct
ggtattgatggtggtgggatttttaaagacttcatggagaacattactcgggcagctttt
gatacgcaatatgggctatttaaggagacaatcgatcacctactctaccccaatcctgga
tctggaatgatacatgaacaacatttgcagttgtttcatttccttggaattattctcgga
aaggcaatgtttgaagggattctcgttgatataccatttgcaaccttttttttgagcaag
ctaaagcaaaagcataactatttgaatgatttaccttctttggatcccgaattgtatcgc
caccttatctttcttaagcattatgagggtgacttggcagagttagagttgtactttgta
attgttaacaatgagtttggggagcaaacatcagaagagctggtcccaggtggaaaggac
atacgtgttgtaaatagcaatgttatccagtttattcatcttgttgccaatcaccgtctc
aatacccagatacgtcagcaaagttcttattttttgaggggatttcaacagcttatacag
aaagactggattgacatgtttaatgagcatgaactccagcttttgatatcaggctcagtt
gataatttcgatgtggatgatcttcggtccaacacaaattatgctggtggctatcatcgt
gagcattatgtaattgacatgttttgggagattctcaagaacttttccttggaaaatcaa
cacaagtttttgaagtttgtgactggatgttcaagagggcctttgctaggattcaagaac
ttggaacctttattttgtatacaacgagctgctggtagtgcctctgaagaagctcttgac
cggttgccaacatcagccacttgtatgaacctgttaaagcttcctccgtatagaagtaaa
gagcaaatggagcagaagttgttgtatgctattaatgcagaagcggggtttgatttaagt
tga
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integrated database retrieval system
