Erigeron canadensis (horseweed): 122605131
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Entry
122605131 CDS
T07610
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
122605131
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122605131
04121 Ubiquitin system [BR:
ecad04121
]
122605131
03036 Chromosome and associated proteins [BR:
ecad03036
]
122605131
03400 DNA repair and recombination proteins [BR:
ecad03400
]
122605131
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
122605131
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
122605131
Chromosome and associated proteins [BR:
ecad03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
122605131
DNA repair and recombination proteins [BR:
ecad03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
122605131
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT_2
BRCT
zf-HC5HC2H
zf-HC5HC2H_2
zf-RING_5
zf-C3HC4_2
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-RING_6
zf-C3HC4_3
PTCB-BRCT
zf-RING_2
PHD_NSD
RTT107_BRCT_5
Prok-RING_4
LIG3_BRCT
Motif
Other DBs
NCBI-GeneID:
122605131
NCBI-ProteinID:
XP_043633946
LinkDB
All DBs
Position
6:complement(33484611..33488902)
Genome browser
AA seq
670 aa
AA seq
DB search
MEQIISSNQRSLLNPYVLHLQKLGLELKCPLCLGLFKKPVLLPCTHIFCNSCLSEATSEC
PACKHSYVHQEVKSASFMENIVNIYKNLDATFNASLVHPVCSDVKSVNLQTDMPTLLNGS
AVTTPESGRKQEFKKSVGENPGVLDAERKAVGEKELETGVGGVGFMQMEQMSPPFSSDSK
DDGNSSDPNGCHKNSVCSSKRPAENDAHVTNVELNTRCISGTACQTNEGKRQKKNDTELD
LNGLPQSNGVSCDNITTNLETKFEKSLSGEKPSVVLDRLDLRENLCAFCHTSECSIVSGP
IVSYAQGKEVTGSLSNFSKVTHVHEKCISWAPQIYFNKSGLIKNLESEVARANKLKCASC
GKKGAVLGCFMKSCQRSYHVPCAYHVEDCRWDQEDLLLLCPKHISTKFPREKKSKAGKIV
TEKRISSSLNSCTSTTLLAGGKDLVLCGSALSPEEKYSLVDFGRSSGAIVSKYWRNNVTH
VIAATDSNGACTRTLKVLMAILNGRWIVTTKWVKACIEAGCLVDPEPYEVTLDTHGCSGG
PKAGRLRVLNNGPKLFNNMNFYFIGNFVKAFKNDLLNLVTTAGGTISEVKDQLMSTSNAA
GDVKANQVTLVVYNADLSDRYEFEDEEAIKFQRLAAAENVAQEYGSRVVGHTWILESVAA
CSLLPFTSRS
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaataatatcttctaatcaaagatctctactgaatccttatgttcttcattta
caaaagcttggccttgaactcaaatgccccctttgtttagggttgtttaaaaagcctgta
ttgcttccctgcactcatattttttgcaattcgtgtttgtctgaggctacatctgagtgt
cctgcttgtaaacattcatatgttcatcaagaggttaaatctgcatcttttatggaaaat
attgttaacatttataagaatcttgatgccaccttcaatgcaagtcttgttcatcctgta
tgttcggatgttaagtcagtgaatttgcaaactgatatgcctaccctattgaacggctct
gctgttactacccctgaaagtggtcgaaaacaagagtttaagaagagtgttggtgagaat
cctggtgttttagatgcagagcggaaggcggtgggtgagaaggaattggagactggtgtt
ggtggagttggatttatgcagatggagcagatgagccctccgttttcgagtgatagcaaa
gatgatggtaattctagtgatccaaatggttgccataagaattcggtatgttcatcaaag
agaccagctgagaatgatgcccatgtcacaaatgtagagttgaacactagatgcatctct
ggaaccgcctgtcaaaccaatgaaggcaaaaggcaaaagaaaaatgatactgagctggac
ttaaatggccttcctcagagtaatggtgtttcttgtgataatataactacaaatttggag
accaagtttgaaaaatctctatctggtgaaaagccatctgttgttttggatcgtttggat
ttgagagagaatctttgtgctttttgtcacacttctgagtgctcgattgtaagtggacca
attgtatcctatgctcaaggaaaggaagtgactggcagtctctctaatttctctaaggtt
acacatgttcatgaaaaatgtatttcatgggctccacaaatttacttcaacaagagtgga
cttattaagaacttagaatctgaagtggcaagggctaacaagttgaagtgtgccagctgt
ggtaaaaagggggctgttcttggttgctttatgaagtcatgtcaaagatcttaccacgtg
ccttgtgcatatcacgttgaagattgcagatgggatcaagaggatttgctgttgctgtgc
ccgaaacatatatcaacaaaatttccaagagaaaagaagtcaaaagctgggaagatagtt
actgagaaaagaatatcttcgagtttgaattcttgtacaagtacaacattgttagctggt
ggaaaggatttggtgttatgtggttctgctctttctccagaagaaaagtattctttggtt
gattttggaagaagtagtggggcgattgtgtccaaatactggagaaataatgttacccat
gtcattgctgccacagattccaacggtgcgtgcacaagaacactgaaagttctgatggcc
attctgaatggcagatggattgttacaacaaagtgggtaaaagcatgcattgaagctgga
tgtcttgttgatccagagccctatgaagttactcttgatacccatggctgttctggtggc
cccaaagctgggaggctaagagttcttaataatggtccaaaacttttcaacaacatgaac
ttttactttattgggaattttgtgaaagctttcaagaatgatctcttaaacttggttacc
actgctggaggcactatcagtgaggtcaaggatcaactaatgtcaacaagtaatgctgct
ggagatgtgaaagcaaatcaagttactttggttgtttacaatgccgacctttcagatcgc
tatgagtttgaagatgaagaagcaatcaaatttcaaagattagctgcagcagagaatgta
gctcaagaatatgggtcacgggttgttggtcatacttggattttggaatctgttgctgct
tgcagtttactgccttttacttctaggtcgtaa
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