Erigeron canadensis (horseweed): 122605177
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Entry
122605177 CDS
T07610
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122605177
04121 Ubiquitin system [BR:
ecad04121
]
122605177
Enzymes [BR:
ecad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122605177
Membrane trafficking [BR:
ecad04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
122605177
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122605177
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-ANAPC11
zf-RING_5
Zf_IFT144_1st
zf-C3HC4_3
zf-HC5HC2H
zf-Nse
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
122605177
NCBI-ProteinID:
XP_043634007
LinkDB
All DBs
Position
6:19707003..19709070
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AA seq
359 aa
AA seq
DB search
MEEERESTTRYWCYACSRVVNPVMEVESLKCSQCQGGFVEEMGSVRGQNRRSDPEPGISL
WAPLMLGLLNSPRGNRGLEEETNQENGHGSEQHSQHEGQQQQQEPGPEVRSRASAAALLH
LLHGIRASLAASAPQNNEEGRGENNRDTERERERERVIFIDPFNQTIIVQGGGNTGNPFD
LTNSAQNNPFGSFGDYFLGPGLEQLLQHLAENDPNRYGTPPAQKEAVEAMPTIKIEEDSV
QCSVCLEEFEIGAEARQMPCKHSFHGDCILPWLELHSSCPVCRYQLPADESKVNRNQDGS
RGNLIHSNGETRHGGNNEERRFSGSLFWPFSLFSPRSPTSRENGSSPRVQEADHREDGL
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagagagagagtcaacaacaagatattggtgctatgcatgttctagagttgtt
aatccagttatggaagttgaatcactcaaatgttcacaatgtcaaggtggattcgtggag
gaaatgggtagcgttcggggtcagaaccgccgttctgaccctgaacccggtatctcattg
tgggcccctctcatgcttggattgctcaactcccctcgtgggaatcgaggattagaggag
gaaacaaaccaagaaaatggtcatggttctgaacaacatagtcagcatgaaggacagcag
cagcagcaggagccgggccctgaagtaaggagcagggccagcgctgctgctctccttcat
cttttacatggtatcagagctagtcttgcagcatctgcacctcagaataatgaagagggt
agaggagaaaataaccgtgacacagagcgagaacgtgaacgtgaacgtgttatttttatt
gatccttttaatcagactataattgttcaaggtggtggtaatactggcaacccgtttgat
ttaaccaattcggcacaaaacaacccttttggttcatttggtgattatttcttgggacct
ggtttagagcaacttctacaacatttagccgaaaatgacccaaaccgatatggtacccca
ccggcccaaaaagaagcggtagaggcaatgccaactataaaaattgaagaggattctgtt
caatgttcggtttgtttagaggaatttgagataggggctgaagcacgacaaatgccatgt
aaacatagctttcatggtgattgtatcttgccatggttagaacttcatagctcttgtcca
gtttgccgttatcaattgcctgcagacgagtcaaaggtcaaccgcaatcaggacgggtca
aggggtaatttgatacattcaaatggtgaaacaagacatggcgggaataatgaagaaagg
cggttttctggtagtcttttctggccctttagtttgttttcacctaggtcacctacttca
agggaaaatgggtcatcgccacgtgtccaagaagctgatcatagggaagatggtctctga
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