Erigeron canadensis (horseweed): 122605217
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Entry
122605217 CDS
T07610
Name
(RefSeq) coronatine-insensitive protein 1-like
KO
K13463
coronatine-insensitive protein 1
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
122605217
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122605217
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
122605217
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
Motif
Other DBs
NCBI-GeneID:
122605217
NCBI-ProteinID:
XP_043634056
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Position
6:complement(17614941..17617883)
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AA seq
588 aa
AA seq
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MNMQQEEEVKSSRSDTEFTDTVFNCVVPYIHDSRDRSSVSLVCRKWCELDGATRKHVTIG
MCYSTTPSRLVHRFPLLESLTIKGKPRAAMFDLIPENWGGFVTPWVLEISRSLTCLRSVH
FRRMIVKDSDLELLTRSRGNELRVLKLDLCSGFSTDGLLHIGRVCSNLRELYLQESLIVE
KDGDWLHELAMRNMVLESLNFYMTELVKFDYKDLKLIAKNCCQSLVSVKISDCDVTDLVD
FFSYAVNLEKFGGGAFGNQAEKYIGMKFPPRLRSMALNYISQPEIPVVLPIASRITELDL
LYAMIDTDGHCFLVQRCPNLVVLDTRDAIGDVGLQVLGHFCKKLRRIKIERGDDEEGFVS
QRGLIDLAQGCVELECLHVNLTDITNEALYCVGTHLKNLYDFRMILLDKEVTITELPLDN
GIRALLSGCSKIERLGVYLRPGGLTDVGLGYIGQYAENVEYMLLGFTGETDAGFIELSKG
CPKLQKLEMRGCGFSEQALATFVLNVASLRYLWIQGYHASENCSGLMDMARPFWNMELIS
SKTERHEDVPQNPEQQQPPSLLAYYSLAGQRTDFPEAVLPLHPPLNVQ
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgcagcaagaggaagaggtcaaatcatcccgatccgatacggagttcaccgac
acggtgttcaactgtgttgttccgtacattcacgacagccgtgaccggagctccgtgtcg
ttggtctgtcggaaatggtgcgagctagacggagcaacacggaaacatgtgactattggt
atgtgttactcgacaaccccgtctcgtttagtacatcgttttcctttgttagaatcgttg
actattaaaggcaaacctcgtgctgctatgtttgaccttatacccgagaattggggcggg
tttgttactccatgggtgttagaaattagtaggtctttgacttgtctgagaagtgttcat
tttagacggatgattgttaaagattctgatctcgaattgttgactaggagtcggggaaat
gagcttcgggttttgaagctcgatctgtgttctgggttttcgacggatgggttgttgcat
attggtagggtgtgtagtaatttgagggaattgtatttgcaagaaagtttgattgtggag
aaagatggggattggttacatgaattagctatgcgtaatatggttttggagtctttgaat
ttttatatgactgaacttgttaagtttgattataaagatttaaagcttattgcgaaaaat
tgttgtcagagtttggtgtctgttaagattagtgattgtgatgttacggatcttgtggat
ttctttagctatgctgttaacttagaaaagtttggtggcggggcgtttggtaaccaagca
gagaaatatattgggatgaagtttcccccgcgtttgagaagcatggcgttgaattacatt
agtcaacccgaaattccagttgtgctgcctattgcttctcgaataacagaacttgatctt
ctttatgcaatgattgatacagatggtcattgctttttggttcaaaggtgtcctaatttg
gtagtacttgatacaagggatgcgattggggatgtgggattacaagttcttggtcacttt
tgcaagaaattgcgaaggattaagattgaaagaggtgatgatgaagaggggtttgtttcg
caaagagggctgattgatctggcacaaggatgtgtcgagttagaatgcttacatgtaaat
ctcactgatattacaaatgaagctttgtattgtgtaggaactcacttgaaaaacctgtat
gattttcgtatgattttacttgataaagaagttacaattacagaattaccactagataat
ggaattcgggctttgttgagtgggtgtagcaagatagaaaggttaggtgtttatcttagg
cctgggggattgactgatgtcggtttgggctatattggacaatatgctgaaaatgtggaa
tatatgcttcttggttttactggggaaactgatgcagggttcatagagttatcaaaaggg
tgtccaaaattgcagaaacttgaaatgagaggctgtggtttcagtgagcaagcacttgct
acttttgtgctaaatgtagcttctttgaggtacttgtggattcagggttaccatgccagt
gaaaattgtagtggtttaatggacatggctcgtccattttggaatatggagttaattagt
tctaaaaccgaaaggcatgaagatgtaccccagaatccagagcagcagcaaccaccatct
ttgcttgcatattactcgcttgctggacaaagaacggattttccagaggctgttcttccc
ctgcacccacctttaaatgttcagtaa
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