Erigeron canadensis (horseweed): 122605240
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Entry
122605240 CDS
T07610
Name
(RefSeq) U-box domain-containing protein 14-like
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
122605240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122605240
Enzymes [BR:
ecad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122605240
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
U-box type E3
122605240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
zf-Nse
HEAT_2
zf-RING_UBOX
MLKL_N
Arm_2
Neurochondrin
KAP
IncFII_repA
zf-C3HC4_4
zf-NOSIP
Motif
Other DBs
NCBI-GeneID:
122605240
NCBI-ProteinID:
XP_043634086
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Position
6:complement(39099183..39103060)
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AA seq
625 aa
AA seq
DB search
MANNQDEGDLVSQLVDLVKEISELSECRNASRKMYGNLMRRVKLLSPLFEELKDNSQQKL
EDGDVKGLLALRIALNLALELLKSVNHGSKIFQALQIEKSASRFHEVTTQIEEALSQIHY
ERLDLTEEVREQIELVQVQFKRAKGRMDSPDLQLQKDLGIVDKGNEPDLEAVKRLSEKMY
LTTVNDLKRESMAIHDMVISTGGHPEDRFELMSSLLKKIKDCVMLGNPEVDIGEGEKSVM
RHRSPVIPDDFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKTQQTLLHTAL
TPNYVLKSLIALWCDSNGVELPKSNNKPGRSGSECDRTVIGSLLQKLVIGDSDEQRSAAG
ELRLLAKRNADNRVCIAEAGAIPLLVELLSSRDGRTQEHAVTALLNLSINEANKGIIVSV
GAIPEIVDVLKNGSTEARENAAATLFSLSVLDENKVAIGAAGAIPPLIDLLQEGTPRGKK
DAATAIFNLCIYQGNKVRAVRGGIVTPLMKLLRDASGGMMDEALAILAILASHHEGKMAI
AEAEPMPVLVEVIRTGSARNRENGSAVLWSLCAGDVRSLKIMKELGAEEVLKELSENGTD
RAKRKAGSVLELLQRIDTVETLVSS
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggctaataatcaagatgagggagatttagtaagtcaactggttgatttggtcaaagaa
atatcagagttatctgaatgcagaaatgcttcaagaaagatgtacggaaatttgatgaga
agggtgaagcttttgagtccattatttgaggaacttaaagataatagtcaacaaaaactt
gaagatggtgatgttaaaggattactagctttaaggattgctttgaatttggctttggaa
ctccttaaatcggtcaatcatggcagcaagatttttcaggcgcttcaaattgagaaaagt
gcaagcaggtttcacgaagtaacaacacagattgaagaagcgttgagtcaaattcattat
gagagactcgatttaactgaggaagttcgtgaacagattgaacttgtgcaggtgcaattt
aaaagagcgaaaggacgaatggattctcctgatttgcagcttcaaaaagatttaggcatt
gtcgataagggaaatgagcctgatcttgaagcagtcaaaagactatctgaaaagatgtat
cttacaacggttaatgatctaaagagggaatcaatggcaattcatgatatggtcatatca
actggtggccatcctgaagatcgctttgagttaatgtcttctcttctcaagaaaattaaa
gattgtgtgatgctgggaaatcccgaagttgatattggggagggagaaaagagtgttatg
aggcatcgttctcctgttattccagatgactttcgttgccccatatctcttgaattaatg
aaagatcccgtgattgtgtcaactgggcagacgtatgagaggtcctctattcaaaaatgg
ctcgacgctggacacaagacatgcccaaaaactcaacaaacattgctacacacggcgttg
actccaaactatgtcttaaagagtcttattgctttatggtgcgatagtaatggggttgag
ctgcccaaatctaacaataaaccaggacgcagcggttcagagtgtgatcgaaccgtgatc
gggtcattacttcaaaaacttgtcatcggggactcagacgaacaaagatcagccgctgga
gagcttaggttattagccaaaagaaacgctgataacagagtatgtatagctgaggctggc
gctattccacttttggtagaactactatcatctcgtgacggtaggactcaagaacacgcg
gtcaccgcccttttgaacttgtcaataaatgaggctaacaaaggcattattgtgagtgtt
ggagcaatacccgaaattgtagatgttttgaaaaatgggagtacagaagctcgagaaaac
gcagctgccaccctttttagcttgtctgtgctggatgaaaacaaagttgctattggtgcc
gctggtgcaataccaccgcttatcgatttgcttcaagaagggacacctcgaggaaaaaaa
gatgccgcaactgccatttttaacctctgtatctatcaaggaaacaaggttcgggcagtt
cggggagggatcgtgacacctttaatgaaattgttgagagatgccagcggtgggatgatg
gatgaggcattggcgattttagctatacttgcgagccaccatgaagggaagatggctatt
gctgaagctgagccaatgccggttttggtggaagtaatacggaccggatcagccagaaac
cgggagaacgggtcagcggttttgtggtcattgtgtgcaggtgatgttcggtcgttgaaa
ataatgaaggagcttggagcagaagaggtgttgaaggagttgtctgaaaatggaacagat
agagctaagagaaaggcgggaagcgtattggaacttctgcaacgaattgatacggttgaa
accctggtcagttcttga
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