Erigeron canadensis (horseweed): 122605426
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Entry
122605426 CDS
T07610
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 27
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ecad01002
]
122605426
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122605426
04121 Ubiquitin system [BR:
ecad04121
]
122605426
Enzymes [BR:
ecad01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122605426
Peptidases and inhibitors [BR:
ecad01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
122605426
Membrane trafficking [BR:
ecad04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
122605426
Ubiquitin system [BR:
ecad04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
122605426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
ARA70
Motif
Other DBs
NCBI-GeneID:
122605426
NCBI-ProteinID:
XP_043634312
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All DBs
Position
6:24789951..24796265
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AA seq
555 aa
AA seq
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MKLQCLLKPLKHGFKIISSPRFQAYLATGIIGVAGLIVAYKDDRGIARFDQFMLSLSSES
PPERESLPEKLWVPGLQNLGNNCFLNVVLQALASCSSFLSSLQKIVEEFEVSSEGEETRD
MPLAVSLNALLQELSIVRYKGKVLSPRKVMLAMSQYTPNFNLTSQQDAEEALAHMLSSLR
EECSEYFASYQSSLAVATNLGSRILTLERRVKLNELDRWTQIFLGPFNGIVGSILTCQSC
SFQISLEFQFFNCLYLSPPTYDGGSSIIPGCSISDCLKNFFAAERVENYFCTHCWHTTAL
KYLSMLNKDEKSIEKLQSCSKQDTCDCGNISSLGSLPWSNKYSHTFKQLHIARSPKILCL
NLQRASVNMFGELIKLKGHISFPVTLNMSSFKKQGVDIKHSEQKLPINQLVQQNLQPIRY
SDLSRLQMNRYPLDHKYKQPLEEVLGDTEIREEHTTYNTAHQDNEVLESWNLTPNEHHTY
KLVSVVEHFGNTGSGHYTVYRRVINTELDGTSESSHVNWVGVSDSKVYRVSEEDVLAAKA
SLLFYERVSERDSTM
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttcaatgtttgcttaaaccattgaaacatggttttaaaatcatttcttcacct
aggtttcaagcatatttagcaactggtatcattggtgttgctggtttgattgttgcctat
aaagatgacagaggaatagcgcgtttcgatcaatttatgctctctttgtcgtcggaatcg
ccgccggagagagaatctttgccggaaaagttgtgggtccctggtttgcaaaatcttggt
aacaattgtttcttaaatgtagttttgcaggctttggctagctgttcttcttttttgagt
tctctccaaaagattgtggaggagtttgaagtttcatctgagggggaagaaactagggat
atgccacttgcagtttcattgaatgctttattgcaagaactctctatcgttcggtataaa
ggcaaagtattaagtccacgaaaagtgatgcttgcaatgtctcaatatacaccaaacttc
aatttgacgagtcaacaggatgcggaagaagcattagctcacatgttatcttctttaaga
gaagaatgctcagaatattttgcttcataccaaagttcgctagctgttgcaactaacttg
ggtagccgtattcttactctagagaggagggtcaagcttaatgagctagacagatggacc
cagatctttcttgggccatttaatggaatcgttggcagcattttaacttgccaaagctgt
tcgtttcagatttctctggaatttcagttcttcaattgcttgtacctttcaccacctaca
tatgatggtggtagctctattataccaggatgctccataagcgattgcctgaagaatttt
tttgctgcagaacgggttgaaaactacttttgcactcactgctggcatactaccgccttg
aaatatctatctatgctaaataaggatgagaaaagtattgaaaaacttcaaagctgtagc
aagcaagatacatgtgactgcggaaatatatcatctcttggatcattaccttggtcaaac
aagtattctcatactttcaagcaattacatattgcacgtagcccaaagatcttgtgcctt
aacttacaacgtgcttctgttaatatgtttggggagctaatcaaactcaagggtcatatc
tcttttcctgtgactttgaatatgtcatcgttcaaaaagcaaggagttgacattaaacat
tctgagcagaagttgccaattaatcaacttgtacaacaaaacctgcagccgattcgttat
tctgatctttcaagattacaaatgaacagataccctttggatcacaaatacaagcaacct
ttagaagaggttcttggtgacacggaaattcgagaggaacatactacatataatactgca
catcaagataacgaggtgcttgagagttggaacttgacaccgaacgagcatcatacatac
aaacttgtttctgttgtggagcactttgggaatactggaagtggtcattacacggtctac
agaagggtaattaacactgaacttgatgggacatcagaatctagtcatgtgaattgggtt
ggagtttcggatagcaaagtttacagggtctcggaggaagatgttcttgctgcaaaggct
agcttacttttctatgaaagagtttcagaaagggattcaacgatgtag
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