KEGG   Erigeron canadensis (horseweed): 122605562
Entry
122605562         CDS       T07610                                 
Name
(RefSeq) SKP1-like protein 1A
  KO
K03094  S-phase kinase-associated protein 1
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad03083  Polycomb repressive complex
ecad04120  Ubiquitin mediated proteolysis
ecad04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    122605562
   04120 Ubiquitin mediated proteolysis
    122605562
  09126 Chromosome
   03083 Polycomb repressive complex
    122605562
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ecad04131]
    122605562
   04121 Ubiquitin system [BR:ecad04121]
    122605562
   03036 Chromosome and associated proteins [BR:ecad03036]
    122605562
Membrane trafficking [BR:ecad04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    122605562
Ubiquitin system [BR:ecad04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     122605562
   Cul7 complex
     122605562
Chromosome and associated proteins [BR:ecad03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     122605562
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     122605562
SSDB
Motif
Pfam: Skp1_POZ Skp1 BTB
Other DBs
NCBI-GeneID: 122605562
NCBI-ProteinID: XP_043634455
LinkDB
Position
6:32263762..32264569
AA seq 163 aa
MASSSSSSSKKLVVLKSSDGETFEVEEVVAMQSETIKHMIEDDCVDSGIPLPNVTSNILS
KVIEYCKKHVKDAGDNADVSEKDLKAFDEEFIKVDQGTLFDLILAANYLNIKGLLDLTCQ
TVADMMKNKQPEEIRKMFNIKNDFTPDEEAAVRAENAWAFEQL
NT seq 492 nt   +upstreamnt  +downstreamnt
atggcatcatcgtcatcatcatcatctaagaaactcgtcgtgctaaagagctcagacggc
gagacgtttgaagttgaagaggtggtggcaatgcagtcggaaacgatcaaacatatgatc
gaagacgactgcgttgactccggcatccctctccctaatgtaacaagcaacatcctctcg
aaggttatcgagtactgcaagaaacatgtgaaggacgccggcgataatgctgatgtttcc
gagaaggatctgaaggcgtttgatgaagaatttattaaagttgatcaggggactcttttc
gatcttattctggctgctaactatctcaatatcaagggcttgttggacctgacctgccaa
actgttgctgacatgatgaaaaacaagcaacctgaggaaatccgcaagatgtttaacatc
aagaatgatttcacccctgatgaggaggcggcggtccgtgctgagaatgcttgggccttt
gagcaattataa

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