Erigeron canadensis (horseweed): 122605607
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Entry
122605607 CDS
T07610
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINAT1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122605607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122605607
Enzymes [BR:
ecad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122605607
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
122605607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
122605607
NCBI-ProteinID:
XP_043634502
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All DBs
Position
6:36098726..36101321
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AA seq
307 aa
AA seq
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MAPGGNVYQDVTESRSALADYGVKSANVEGRSGLRLCGPAVRRPGMASNSAVHELLECPV
CLNIMCPPIHQCPNGHTICLVCKTKVHNSCPICRQELGNIRCLALEKVAESIELPCKYHS
YGCQDILPYHNRMRHEENCKYRGYNCPYAGAECPITGDIPFIVAHLKTDHNVDMHDGCSF
NHRYVKPNPHEIENATWMLTIFNCFGYQFCLHFEAFHLGTAPVYMAFLRFMGDENDANKF
SYSLEVGGNGRKIKWQGIPRSIRDSHKTVRDSLDGLIITRNIALFFSGGDGQELKLKVSG
KIWKEQS
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggctcctgggggtaatgtttaccaggatgtcactgaatcgcgcagtgcacttgcggat
tatggcgtcaagtctgcaaatgtagaaggaagaagtggcctcagattatgcggtcctgct
gttagaaggcccggaatggcatcaaacagtgccgttcacgagctactcgagtgccctgtg
tgcctaaacataatgtgcccgcccattcatcagtgtccaaatgggcacacaatatgtctt
gtttgcaaaactaaggtgcataatagttgcccgatatgtcggcaagagcttggaaatata
aggtgtctggccttggagaaagtagcagagtccattgagttgccttgcaagtaccattct
tatggttgccaagatattttaccatatcataacaggatgagacacgaggagaattgcaag
tatagggggtataattgtccttatgcaggtgcagaatgtccgatcactggtgatattcca
ttcattgtggcgcatctgaaaaccgatcataatgttgatatgcatgatggctgtagcttt
aaccaccgatatgtaaagcccaatcctcatgaaatcgagaatgctacttggatgttaacc
atcttcaactgctttggatatcaattctgcctgcattttgaagcatttcatttgggaacg
gcaccagtttacatggcctttttgcgtttcatgggtgatgaaaacgatgccaacaagttc
agttacagccttgaggttggaggaaatggtaggaagattaaatggcaagggatcccaaga
agcattcgtgacagtcacaagactgttcgtgacagtcttgatgggctgattataacaaga
aacatagcactgtttttttccggtggtgatgggcaggaactgaagctgaaagtgtctggc
aaaatatggaaagaacagtcttga
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