KEGG   Erigeron canadensis (horseweed): 122605673
Entry
122605673         CDS       T07610                                 
Name
(RefSeq) elongator complex protein 2
  KO
K11374  elongator complex protein 2
Organism
ecad  Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ecad03016]
    122605673
Transfer RNA biogenesis [BR:ecad03016]
 Eukaryotic type
  tRNA modification factors
   Elongator complex
    122605673
SSDB
Motif
Pfam: WD40 Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_EML WDR55 Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_WDR36-Utp21_1st Beta-prop_Aladin ANAPC4_WD40 WD40_Gbeta Beta-prop_WDR35_TULP_N Beta-prop_HPS5 Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_WDR11_1st Beta-prop_NUP159_NUP214 Beta-prop_RSE1_2nd NBCH_WD40 Beta-prop_WDR19_1st WD40_RFWD3
Other DBs
NCBI-GeneID: 122605673
NCBI-ProteinID: XP_043634564
LinkDB
Position
1:40237085..40243886
AA seq 825 aa
MVNIEVERVFIGGGCNRIVNNVSWGACGLVSFGSQNAVSIFNPQTAKILTTLPGHKASVN
CTHWLPNSKFAYKASDWEKHYLLSGDAQGVIVLWEFTLAENKWRYVSQLEVSHKKGVTCI
TAVVLSRNEAIFASTSSDCVVNLWKLALSDGAGDCTIINLHSLSTGLKPMVTLSLAELPG
STTHLILAMGGLDNKIHLYCGERTGQFVRACELKGHTDWIRSLDFSLPLSLTGEPHNLLL
VSSSQDKGIRIWKMVLCDSAGNFDKTKAVNSLAYYIKGPVFVAGSFSYQVSLESLVIGHE
DWVYSVEWQPPSLKENKTCYQPQSILSASMDKTMMIWQPERTTGIWVNVVTVGELSHSAL
GFYGGHWSPDGDSILAHGYGGSFHLWKNFGSEIGNWKPQKVPSGHFAAVTDIAWGRCGEY
LMSVSDDQTTRIFALWLNEAKLRGDDTWHEIARPQVHGHDINCLAIIQGKGNHRFVSGAD
EKVARVFEAPLSFLKTLNHATSNLHDDLQVDVQVLGANMSALGLSQKPIYVQASSETSER
SGNEGFDTLETIPDAVPSVLTEPPIEEQLAWHTLWPESHKLYGHGNELFSLCCDHQGKLV
ASSCKAQSMSVAEIWLWEVGTWKAVGRLQSHSLTVTRMEFSHDDKYLLAVSRDRHLSLFF
IDQTDQTSYQLLTRQEAHKRIVWACSWNPFGHQFATGSRDKIVKIWEVQKESCVQLMTLP
AFKSSVTALSWTGLHEHNNNGVLAVGMENGLIELWSLSFANSEQDSSISPPKASLIIQFD
PFMCHVSSVNRLAWRISTKDDGSESMQLASCGADHCVRIFKVSFV
NT seq 2478 nt   +upstreamnt  +downstreamnt
atggttaatatagaagtagagcgcgtgtttatcggaggcggttgcaacagaatagtgaac
aatgtttcttggggcgcctgcggtcttgtttcttttggctcccaaaacgccgtttccatt
tttaaccctcagactgcaaagatattgactacactgccaggtcataaggcttcagttaac
tgtacacattggcttccaaacagcaagtttgcatataaagcaagtgattgggaaaagcat
tatttattatctggtgatgctcaaggagttattgttttatgggagtttactctagctgaa
aataagtggagatatgtatcacaactggaggtatcacacaagaaaggtgttacgtgcatt
actgcagttgtgttatctcgaaatgaagcaatatttgcatctacgtcttcggactgtgtt
gttaatctgtggaaactagccctatctgatggtgcaggcgattgtactattataaatttg
cattccctttctactggtttgaaaccaatggttacactttctctagcggaattgccagga
agtaccacacaccttattttggctatggggggactcgataacaagattcatttgtattgc
ggtgagaggacaggacagtttgttcgtgcttgtgagctaaaagggcatacagattggatt
agaagtttggatttttcattacccttatcactaactggagagccacataatcttcttctt
gttagttcttctcaagataaaggcatacgtatatggaaaatggtactgtgtgattctgct
ggtaattttgataaaacaaaagcagtaaacagcctggcctattacataaaaggtcctgtt
tttgtagcgggctctttctcttatcaagtatcattagaatcgcttgtcataggtcatgag
gattgggtatattcagtcgagtggcagccaccttcattaaaagaaaataaaacatgctat
caaccccaaagcatcttatctgcatctatggacaagactatgatgatatggcaacccgag
agaacaacaggtatctgggtcaatgtagtgactgttggggagttgagtcattctgcttta
gggttctatggtgggcattggagcccggatggtgattctatattagcccatggttacggt
ggatcattccatctttggaagaattttggttctgagattggtaattggaaaccccaaaaa
gttccatctgggcattttgcagcagtgacagatatagcatggggtcggtgtggtgaatat
ctgatgtcagtcagcgatgatcagacgactagaatatttgctttgtggctaaacgaggct
aagttaagaggagatgacacttggcatgaaattgctcgccctcaagttcatggtcacgat
attaattgcttagcaattattcaaggaaaagggaaccacagatttgtaagcggagctgat
gagaaagttgctagagtttttgaagcccctttatcattcttgaaaacgctaaatcacgca
acttctaatctacatgatgacctgcaagttgatgtccaggtattgggtgccaatatgtca
gctctcggtctgtctcagaagcctatttatgttcaagcttcaagcgaaacatcagagaga
agtggtaacgaaggttttgatacactcgagactatcccagatgcagttccttcagttttg
actgaacctcctattgaggaacagttagcatggcatacattatggcctgagtcccacaaa
ctatatggtcatggaaatgaactcttttcactatgttgtgatcaccaagggaaacttgtt
gcctcatcttgtaaggcccaatcaatgtcagtggcggaaatatggctttgggaggttggt
acatggaaggcagttggccgattgcaatctcatagcttaacagttacccgaatggaattc
tctcacgatgacaaatatcttttggccgtctcaagggatcgccatttgtcactctttttt
atagatcaaacagatcaaaccagttaccagcttttaacaaggcaagaggcacacaaacga
atagtatgggcatgctcttggaacccctttggtcaccagtttgccactggttcaagagac
aagatcgtaaagatctgggaggtgcagaaagaatcttgtgtgcaacttatgactctgcct
gctttcaaaagcagcgtcaccgccctatcatggacaggccttcacgaacataataacaac
ggggttcttgcagttggaatggaaaatgggcttatagagctatggagtctctcttttgca
aatagtgaacaggattctagtatttcaccaccaaaagcctctctaatcatccaattcgat
ccgtttatgtgccatgtttcatcagtgaaccgtttagcatggagaatctccacaaaggat
gatggttccgaaagtatgcagcttgcttcatgtggagctgatcattgtgttagaatattc
aaagtaagttttgtctaa

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