Erigeron canadensis (horseweed): 122605673
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Entry
122605673 CDS
T07610
Name
(RefSeq) elongator complex protein 2
KO
K11374
elongator complex protein 2
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecad03016
]
122605673
Transfer RNA biogenesis [BR:
ecad03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
122605673
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
WDR55
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
ANAPC4_WD40
WD40_Gbeta
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_WDR11_1st
Beta-prop_NUP159_NUP214
Beta-prop_RSE1_2nd
NBCH_WD40
Beta-prop_WDR19_1st
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
122605673
NCBI-ProteinID:
XP_043634564
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Position
1:40237085..40243886
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AA seq
825 aa
AA seq
DB search
MVNIEVERVFIGGGCNRIVNNVSWGACGLVSFGSQNAVSIFNPQTAKILTTLPGHKASVN
CTHWLPNSKFAYKASDWEKHYLLSGDAQGVIVLWEFTLAENKWRYVSQLEVSHKKGVTCI
TAVVLSRNEAIFASTSSDCVVNLWKLALSDGAGDCTIINLHSLSTGLKPMVTLSLAELPG
STTHLILAMGGLDNKIHLYCGERTGQFVRACELKGHTDWIRSLDFSLPLSLTGEPHNLLL
VSSSQDKGIRIWKMVLCDSAGNFDKTKAVNSLAYYIKGPVFVAGSFSYQVSLESLVIGHE
DWVYSVEWQPPSLKENKTCYQPQSILSASMDKTMMIWQPERTTGIWVNVVTVGELSHSAL
GFYGGHWSPDGDSILAHGYGGSFHLWKNFGSEIGNWKPQKVPSGHFAAVTDIAWGRCGEY
LMSVSDDQTTRIFALWLNEAKLRGDDTWHEIARPQVHGHDINCLAIIQGKGNHRFVSGAD
EKVARVFEAPLSFLKTLNHATSNLHDDLQVDVQVLGANMSALGLSQKPIYVQASSETSER
SGNEGFDTLETIPDAVPSVLTEPPIEEQLAWHTLWPESHKLYGHGNELFSLCCDHQGKLV
ASSCKAQSMSVAEIWLWEVGTWKAVGRLQSHSLTVTRMEFSHDDKYLLAVSRDRHLSLFF
IDQTDQTSYQLLTRQEAHKRIVWACSWNPFGHQFATGSRDKIVKIWEVQKESCVQLMTLP
AFKSSVTALSWTGLHEHNNNGVLAVGMENGLIELWSLSFANSEQDSSISPPKASLIIQFD
PFMCHVSSVNRLAWRISTKDDGSESMQLASCGADHCVRIFKVSFV
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atggttaatatagaagtagagcgcgtgtttatcggaggcggttgcaacagaatagtgaac
aatgtttcttggggcgcctgcggtcttgtttcttttggctcccaaaacgccgtttccatt
tttaaccctcagactgcaaagatattgactacactgccaggtcataaggcttcagttaac
tgtacacattggcttccaaacagcaagtttgcatataaagcaagtgattgggaaaagcat
tatttattatctggtgatgctcaaggagttattgttttatgggagtttactctagctgaa
aataagtggagatatgtatcacaactggaggtatcacacaagaaaggtgttacgtgcatt
actgcagttgtgttatctcgaaatgaagcaatatttgcatctacgtcttcggactgtgtt
gttaatctgtggaaactagccctatctgatggtgcaggcgattgtactattataaatttg
cattccctttctactggtttgaaaccaatggttacactttctctagcggaattgccagga
agtaccacacaccttattttggctatggggggactcgataacaagattcatttgtattgc
ggtgagaggacaggacagtttgttcgtgcttgtgagctaaaagggcatacagattggatt
agaagtttggatttttcattacccttatcactaactggagagccacataatcttcttctt
gttagttcttctcaagataaaggcatacgtatatggaaaatggtactgtgtgattctgct
ggtaattttgataaaacaaaagcagtaaacagcctggcctattacataaaaggtcctgtt
tttgtagcgggctctttctcttatcaagtatcattagaatcgcttgtcataggtcatgag
gattgggtatattcagtcgagtggcagccaccttcattaaaagaaaataaaacatgctat
caaccccaaagcatcttatctgcatctatggacaagactatgatgatatggcaacccgag
agaacaacaggtatctgggtcaatgtagtgactgttggggagttgagtcattctgcttta
gggttctatggtgggcattggagcccggatggtgattctatattagcccatggttacggt
ggatcattccatctttggaagaattttggttctgagattggtaattggaaaccccaaaaa
gttccatctgggcattttgcagcagtgacagatatagcatggggtcggtgtggtgaatat
ctgatgtcagtcagcgatgatcagacgactagaatatttgctttgtggctaaacgaggct
aagttaagaggagatgacacttggcatgaaattgctcgccctcaagttcatggtcacgat
attaattgcttagcaattattcaaggaaaagggaaccacagatttgtaagcggagctgat
gagaaagttgctagagtttttgaagcccctttatcattcttgaaaacgctaaatcacgca
acttctaatctacatgatgacctgcaagttgatgtccaggtattgggtgccaatatgtca
gctctcggtctgtctcagaagcctatttatgttcaagcttcaagcgaaacatcagagaga
agtggtaacgaaggttttgatacactcgagactatcccagatgcagttccttcagttttg
actgaacctcctattgaggaacagttagcatggcatacattatggcctgagtcccacaaa
ctatatggtcatggaaatgaactcttttcactatgttgtgatcaccaagggaaacttgtt
gcctcatcttgtaaggcccaatcaatgtcagtggcggaaatatggctttgggaggttggt
acatggaaggcagttggccgattgcaatctcatagcttaacagttacccgaatggaattc
tctcacgatgacaaatatcttttggccgtctcaagggatcgccatttgtcactctttttt
atagatcaaacagatcaaaccagttaccagcttttaacaaggcaagaggcacacaaacga
atagtatgggcatgctcttggaacccctttggtcaccagtttgccactggttcaagagac
aagatcgtaaagatctgggaggtgcagaaagaatcttgtgtgcaacttatgactctgcct
gctttcaaaagcagcgtcaccgccctatcatggacaggccttcacgaacataataacaac
ggggttcttgcagttggaatggaaaatgggcttatagagctatggagtctctcttttgca
aatagtgaacaggattctagtatttcaccaccaaaagcctctctaatcatccaattcgat
ccgtttatgtgccatgtttcatcagtgaaccgtttagcatggagaatctccacaaaggat
gatggttccgaaagtatgcagcttgcttcatgtggagctgatcattgtgttagaatattc
aaagtaagttttgtctaa
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