Erigeron canadensis (horseweed): 122605764
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Entry
122605764 CDS
T07610
Name
(RefSeq) protein argonaute 4A-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122605764
03036 Chromosome and associated proteins [BR:
ecad03036
]
122605764
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
122605764
Chromosome and associated proteins [BR:
ecad03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
122605764
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
122605764
microRNA pathway
RISC loading complex
122605764
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Reo_sigmaC
Motif
Other DBs
NCBI-GeneID:
122605764
NCBI-ProteinID:
XP_043634655
LinkDB
All DBs
Position
6:9670930..9678010
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AA seq
910 aa
AA seq
DB search
MDPVENDGNGVAEEALPPPPPVTEDVVPEKAPEPAKKKVMRVPMARRDLAKKGQKAQLLT
NHFKVNVSNVDGHFFHYSVALFYEDGRPVEGKGVGRKVLDRVHETYDSELAGKEFAYDGE
KSLFTVGALPRNKLEFTVILEDVTSSRNNNGKASPDHEDSDRKRMRRQYQSKTFKVELSF
AAKIPMQAIAQALRGQESENSQEALRVLDIILRQHAAKQGCLLVRQSFFHNDPKMFSDVG
GGVLGCRGFHSSFRTSQGGLSLNIDVSTTMIIQPGPVVDFLINNQNVKDPYSIDWAKAKR
TLKNLRIKASPTNTEYKITGLSEKPCNQQLFSLKQKTKDANGEPEMLEVTVYDYFVSHRN
MPLQYSGDLPCINVGRPKRPTYIPLELCSLVSLQRYTKALSTLQRSSLVEKSRQKPQERM
RVLTDALSRNNYDAEPLLKSCGISISSNFTQVEGRVLQAPRLKAGNGEEFFARNGRWNFN
NKKLVEPTKIEKWAVANFSARCDIRNLVRDLIKCGGLKGIKIDEPFDVFEESPQNRRAPP
VTRVEKMFDFIQSKLPGAPQFLLCLLPERKNSDLYGPWKKKCLADFGIVTQCIAPMRVND
QYLTNVLLKINAKLGGLNSILAIEHSSSIPIVSKCPTIILGMDVSHGSPGQSDIPSIAAV
VSSRNFPFMSRYRASVRTQSPKVEMVDSLFKKVSDTEDEGIMRELLLDFYVSSAKRKPDQ
IIIFRDGVSESQFNQVLNIELDQIIEACKFLDDKWCPKFLVIVAQKNHHTKFFLPGSPDN
VQPGTVVDNKVCHPRNNDFYMCAHAGMIGTTRPTHYHVLYDEIGVSPDDLQELVHSLSYV
YQRSTTAISVVAPICYAHLAATQVGTFIKFEDHSETSSSHGGTGVTSAGAVPVTPLPKLQ
ENVCNSMFFC
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggatccagttgaaaacgacggtaatggagtagctgaggaggctttacctccaccacca
cctgttacagaagatgttgtccccgaaaaagctccggagccagctaagaagaaggtcatg
cgtgtgccgatggctaggcgcgatttagctaagaagggacagaaagctcagctgttgact
aatcactttaaagtcaatgtgtctaatgttgatggccacttttttcattatagtgttgcg
cttttttatgaagatggccgtcctgttgaaggaaaaggtgttggaaggaaggtgctcgat
cgggttcatgaaacgtatgatagtgagttagctgggaaagagtttgcttatgatggagag
aagagtttgtttactgttggtgcactgccaagaaacaagctagagtttaccgtcatattg
gaagatgttacatccagcaggaacaacaatggaaaagcaagtcctgatcatgaggacagc
gacaggaagagaatgcggcgccagtaccagtcgaaaacgttcaaagtggagttaagtttt
gctgcgaaaattccaatgcaggcaattgcccaagctctccgtggtcaggagtcagagaac
tcacaagaagctttaagggttcttgacatcatcctcaggcaacatgcagcaaagcaggga
tgtctgctcgttcgccagtctttctttcacaatgacccgaagatgttttctgatgttggt
ggcggtgttcttggctgtagaggatttcattcgagtttccgtacatcgcaaggaggcctt
tctctaaatattgatgtatctacaaccatgatcattcagcctgggccagtggttgatttt
ctaattaacaaccaaaatgtgaaagatccttattcaattgactgggcaaaggctaagcgg
accctcaagaaccttaggattaaagctagtccaactaatactgaatataaaattactggt
ctgagtgagaaaccctgcaatcaacaactgttctcattgaaacagaagaccaaagatgcg
aatggggaaccagaaatgctggaagtcactgtttatgactactttgtatcccatcgaaac
atgcctttgcaatactctggtgatcttccatgcatcaatgttggcagaccgaaaaggcca
acctatattccccttgagctctgttcattagtctcgttacaacgatacaccaaggcgctc
tctaccctgcagcgatcctcgctggttgagaagtcaagacaaaagccgcaagagcggatg
cgggttttgaccgatgcgttgtcccgcaacaactatgatgctgagcccttgttgaagtct
tgtgggatatcgatcagtagcaactttacacaggtcgaaggccgtgttttgcaggctccc
aggttaaaagctggcaatggagaagaattctttgctagaaatggaaggtggaatttcaac
aataagaaacttgtggagccaactaagattgaaaagtgggccgtcgctaacttctcagct
cgatgcgacatccgcaatcttgtgagggatctgattaaatgtggtggactgaaaggaatt
aaaattgatgagcctttcgatgtatttgaggaaagtccccagaacaggagggctccacct
gtgactagagtcgagaaaatgtttgatttcattcagtcaaaacttcctggtgccccacag
tttcttctgtgcttactgcctgagaggaaaaactccgatctttatggtccatggaaaaaa
aagtgtcttgcggattttgggattgtgacacagtgtattgcacctatgagggtcaatgac
cagtacttgactaatgttctactgaaaatcaatgctaagcttggagggttgaattctatc
ttggcaattgagcattcttcatcgattccaattgtatccaaatgtccaactattattctt
gggatggatgtttcacatggttctccaggacaatctgatatcccatctattgctgcggtc
gtcagttcaagaaactttcctttcatgtctcgctacagagcctcagtgagaactcagtcc
cctaaagtggaaatggttgattccctgtttaagaaggtttcagacaccgaggatgagggc
ataatgagggagctgcttcttgatttctatgtcagctcagcaaaaagaaagcctgatcag
attatcattttcagggatggtgtcagcgagtcccaattcaatcaagttctaaacattgag
ctagaccagatcatcgaggcttgcaaatttctggatgacaagtggtgcccaaagtttttg
gttatcgttgcacagaagaaccaccacaccaagtttttcctgccaggatctcccgacaat
gttcaacctggaacggttgtcgataacaaggtgtgtcacccaaggaacaatgacttttac
atgtgtgcacatgcgggaatgattgggacaactcggcctactcattaccatgttctttat
gatgaaattggtgtctcgccagatgatttgcaggagcttgtgcattcattatcttatgtt
taccagcgcagtaccactgccatatctgttgttgctccgatttgctatgcacatcttgct
gccactcaggtggggactttcataaagttcgaggatcactctgaaacaagctcaagccat
ggaggaaccggagtaacatcagctggggcggtgcctgtcactccacttccaaagcttcag
gagaacgtgtgcaactccatgtttttctgttga
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