Erigeron canadensis (horseweed): 122605794
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Entry
122605794 CDS
T07610
Name
(RefSeq) protein CNGC15b
KO
K05391
cyclic nucleotide gated channel, plant
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
122605794
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ecad04040
]
122605794
Ion channels [BR:
ecad04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
122605794
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Cation_ATPase_C
Motif
Other DBs
NCBI-GeneID:
122605794
NCBI-ProteinID:
XP_043634683
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Position
6:35385690..35389475
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AA seq
703 aa
AA seq
DB search
MAYANSRSVRFQDDAGLLKLPPMKKDNLFKVKYNLDGKQIPEQRIEENRQSLKSKVLSRV
FSEDYEREKRKILDPRGHTIRKWNHIFLIACLISLFVDPLFFYLPSVRTENVCIHIGITL
EIGLTIVRSIADLFYMFHIYVRFRTAYVAPSSRVFGRGELVIDSSKIAKKYIRGGLWIDV
LAALPLPQLLIWVIIPSLSGSTMANTKNVLRFIIIFQYLPRLYLIFPLTSQIVGATGVVT
ETAWAGAAYNLMLFMLASHVLGASWYVLSIERQEACWRDLCIREDPTCEDKFFDCERFHD
NNRKTWFQSSNISKQCVPTSGFYPFGIYGEAVTSEVTSALFFNKYFYCLWFGLKNLSSLG
QNLSTTTYVGEILYAIIIATVGLVLFALLIGNMQTYLQSTTIRLEEWRIRRTDTEQWMRH
RQLPPDLRQAVRRYDQYKWVATRGVDEESLLKDLPLDLRRDIKRHLCYDLVRRVPLFDQM
DERMLDAICERLKPSLCTQGTCLVREGDPVDEMLFIIRGNLDSYTTNGGRTGFFNSCKIG
PGDFCGEELLTWALDPRPSVVIPSSTRTVKAISEVEAFALIAEDLKFVASQYRRLHSKQL
RHKFRFYSHQWRTWAACFVQAAWRRYKRRKCASELRALESFASVDYEPNVSPPMHMGQKV
GPEPGFGAHSASTRRSGNLHSGSKSSSVSSLQKPTEPDFSVEE
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggcatatgcaaattcaagatcagtcagatttcaagatgatgctgggctattaaaactt
cctcctatgaaaaaagataatttgtttaaagttaaatacaatcttgatggcaagcaaatt
ccggagcaaagaattgaagaaaacagacaatcgttgaaatcaaaggttctatctcgagtt
ttctctgaagattatgagagggagaaaaggaaaatcttggatcctagagggcatacaatt
cgaaagtggaaccatattttcttgatagcatgtttaatctccttgtttgttgacccttta
ttcttttacttgccatctgtccgtaccgagaacgtttgcatccatatcgggattaccctt
gagatcggtcttactattgtgaggtcaatagcagatcttttttacatgtttcatatctac
gttaggtttcgtactgcctatgtggcaccatcttctcgtgtttttggaagaggcgaactt
gttatagactcttccaagattgctaaaaagtacatcagaggaggtctttggattgacgtc
cttgctgctctgcctcttccacagctgctaatctgggtgatcataccgagtctaagtggc
tcaaccatggctaacacaaagaacgttcttcggttcattataatcttccaatacctcccg
agactctatcttatatttcctttaacatcacaaatcgtcggggctacaggtgttgtcact
gaaacagcatgggctggagctgcttataatctgatgttattcatgttagcaagtcatgtt
ttaggagcttcttggtatgttttatcgatagagagacaagaagcctgttggagagacctg
tgcattcgtgaggatccaacttgtgaggataagttctttgactgtgaaagatttcatgac
aataacagaaaaacttggttccaatcaagtaatatctcaaagcaatgtgtccccacaagt
ggattttacccgtttggtatctatggtgaagctgtcacatcggaagttacatcagctttg
ttcttcaacaagtacttctattgtctttggtttggcttgaagaacctcagttctctggga
cagaatctttcaacgactacatatgttggagaaatcctttatgcaatcattatagctacc
gtggggctagttctctttgctttgttgatcggaaatatgcagacatatcttcaatcaaca
accatccgcttagaagaatggaggatcaggagaactgatacagaacaatggatgcgtcac
cggcaactgccacctgatctccggcaagctgttcgtagatacgatcagtacaaatgggtg
gctacccgaggagttgacgaagaatctcttctcaaagaccttcctctagaccttcgacga
gatatcaaacggcacctttgctatgacctagttcgacgagttccgttgtttgatcaaatg
gacgaaaggatgcttgacgcgatatgtgagcgcctaaaaccatcattgtgtacacaaggc
acatgtttggtcagggagggtgatccagtggacgaaatgttatttattattcgtggaaac
cttgattcatacactacaaatggtggccgaacagggtttttcaactcgtgtaaaattggt
cctggtgacttttgtggtgaggagcttctaacgtgggccttagacccacgaccaagtgtc
gtgattccctcctctactcgaacagtaaaagccatttctgaagtagaagcttttgcactc
attgctgaggatttaaagtttgttgcatcacagtatagaagattgcatagtaaacaacta
aggcataagttccggttttatagccaccagtggcgtacttgggcagcttgtttcgtgcaa
gctgcatggaggaggtataaacgaaggaaatgtgcaagtgaactcagggctcttgagagt
tttgccagtgttgattatgagccaaatgttagtccaccaatgcacatgggtcaaaaggtt
ggacccgagccagggtttggcgctcatagcgcgagtacaaggagatctgggaacttacac
tcggggtcgaaatcaagtagtgttagctccttacagaaaccaactgaacctgatttttca
gtagaagaatga
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