Erigeron canadensis (horseweed): 122605829
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Entry
122605829 CDS
T07610
Name
(RefSeq) autophagy-related protein 13a
KO
K08331
autophagy-related protein 13
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
122605829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122605829
03029 Mitochondrial biogenesis [BR:
ecad03029
]
122605829
Membrane trafficking [BR:
ecad04131
]
Autophagy
Autophagosome formation proteins
ULK complex
122605829
Atg1 complex
122605829
Mitochondrial biogenesis [BR:
ecad03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
122605829
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
122605829
NCBI-ProteinID:
XP_043634721
LinkDB
All DBs
Position
6:44566618..44571269
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AA seq
588 aa
AA seq
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MDFLQYNSNNNNGNEHGRNEQIVCQFLLKTLHIVLESRVPSIVIPNSQLKKKTDKWFNLA
LGCDRPPPAALDSFNFWNRNLMEPMVIDIMLVLPPQSSSASLETVIERWVVQYQPSSSSS
PVSNYKKTYKKSIILLRSLYAMMRLLPASRAYRKLSLSTNTCDFHIDYKLSSFCAPFTRL
EEHLMKQYTFFPVEAQHGRLSISVKYRDSLSDFNLHTSPSFPPEIITDYVGSPATDPFRA
FPTRTNTRPTVWQSPTPPHRPHSWTSGLTKGPPFTHNQSSYGSPPPAHRSSSGRYDFSSS
PTDVYGQRTPSYRPPTHHRRTSFDDYHLSPPFSPSPSPSPPTYLSAGNYMQSRLRSETAP
VSIPNPLMTRSPRYLSPNLSDPNRHSLPPPSPRSTRYEHSSHESPSGIRSLRKSEMSRVG
DLSSGSGSGSANQYSSHKVSRDNKDDSGRFSGLLSSSGSPRIGFSRSSSRLSLQDELDDI
DFSCPFIVDDVDSCDSPISQGFELSSHAKKSQDAAVGALVRMLRTAPPLRQDCSCYSLSD
GVEPELSAGSGSRLFMPRKTSDALEELKGYRDIKHLILSKSGPPLRDV
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggactttctgcagtataatagtaataataataatggtaatgaacatggacgaaatgag
caaatagtttgtcagtttctgttgaaaactttgcatattgtattggagtctagggttcct
tccattgttattcctaatagtcaactcaagaagaagaccgacaaatggtttaatctagca
ttaggctgtgaccgtccccctcccgctgctttagattcttttaacttttggaataggaac
ttaatggaaccaatggttatcgacattatgctagtactccccccgcaatcatcatctgca
tcgctcgagactgttatcgagaggtgggttgttcaatatcaaccttcctcctcctcctcc
cccgtctctaattataagaaaacatataaaaagtctatcatccttttacgctctctatat
gctatgatgagactccttccagcttccagggcttatcgaaagctgtccctatccaccaac
acttgtgattttcatatcgattacaagctctcttccttttgtgctccctttacaaggcta
gaggaacacctcatgaaacaatatactttctttcccgttgaagcccaacatggacgtctt
tctatatctgtcaaatatcgtgattccctctctgattttaacctacatacttcaccatca
tttccacccgagatcattacagattatgttggtagccctgccactgatccttttagggcc
ttccccaccagaaccaatacgaggcctactgtgtggcaatcccctacgcccccccaccgc
cctcatagctggactagtggcctaaccaagggacctccgttcacacataaccaatcctct
tatggatccccaccacctgcacatcgctcttccagtggccgttatgatttttcttcttcc
cctactgatgtttatggacaaaggactcctagttatagaccgccaactcaccatagacgg
accagctttgatgattatcacctgtcaccgccattctctccttctccttcaccatctccg
ccaacatacctttcagctgggaattacatgcaatctcggctgcgctcagagactgccccc
gtcagtattcctaaccccctgatgaccagaagtcctagatacctttctcctaatctgtct
gatccaaatcgacactctcttccacctccatcacctagaagcacacgctatgaacactca
tcacacgagtctccttctgggatcaggtcccttagaaagtcagagatgtcaagggttggg
gacctcagttctggttctggctctggatcagcaaatcagtattctagccacaaggtatca
agggataataaagatgattcagggaggttttctggtttgctctcctctagtggttctcct
cgtattggattctctagaagctccagtagattgtctctccaggatgagttggatgatatc
gacttctcatgcccatttatcgttgatgatgttgattcgtgtgattcccctatcagtcaa
ggatttgagttgtcatcgcatgctaaaaaatcacaagatgctgcagtaggtgcccttgta
cgtatgttgagaacagcaccaccccttagacaggattgtagttgttattctttgagtgat
ggtgttgagccggaattaagcgctggttctggttctaggttgtttatgcctcgaaagacg
tcagatgctttggaggagctaaagggttatagagacataaagcacctcattctgtctaaa
agtggaccccctttgcgagacgtgtaa
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