Erigeron canadensis (horseweed): 122605899
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Entry
122605899 CDS
T07610
Name
(RefSeq) autophagy-related protein 13b isoform X1
KO
K08331
autophagy-related protein 13
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
122605899
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122605899
03029 Mitochondrial biogenesis [BR:
ecad03029
]
122605899
Membrane trafficking [BR:
ecad04131
]
Autophagy
Autophagosome formation proteins
ULK complex
122605899
Atg1 complex
122605899
Mitochondrial biogenesis [BR:
ecad03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
122605899
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
122605899
NCBI-ProteinID:
XP_043634790
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All DBs
Position
6:complement(25233563..25238184)
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AA seq
626 aa
AA seq
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MAVNPHTEPAKMEQIITEFFAKSLHIVLESRCPFVSSRNYSGEQILLSPSSSGSSSSSMR
PRDKWFNLALRDCPAALENIDFWRQSNLEPMVVDVVLVQRPVNWDYGISSPRVGFERKER
YPFGWKSDSDEFGCDGCSEKVIERWVVRYESKKGCKEGGTGSKRSSSTSSHALYKKSILL
LRSLYVTVRLLPAYKIFREINSSGQIRTFNLIHRVSSSVEPLLRRDEAEMQPFMFTPVDT
SCGKLCISLLYLPSISDTISESSTPMSPQFIPDYVGSPLADPLKRLPSVPVPQYSPSSSP
FGRRHSWSYDTFRASPPSALPSPSPTYSESRTLHSKFGHRPPTSSRYSSLEAAQVPTKDM
GYDEYFPSPNFSPSQSPSPPMCLQGSNMLKVLLRSDSAPVYIPTSRLGDAPLSHKPVLPP
FSPPLKATRPSLSLVEKSSGMHQGAIATGKLLSLREEEIARPSSVKISSNSSPHKSFSRS
FSRLSFEDSYDDSEFSGPFVVDDDEMMDHSSRPGSSDRSGNLGTPHDRSGPFTPRKSQDA
AVGALVQMLKKAPPLRQDLHRSQNVCKPSRPENSSSQIKDQPVVEVAPSNMISSRVSGIK
TTSDALEELKVYMDMKQLLLRQSGKS
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggcggttaatccacatacggaacctgcgaaaatggaacagataataaccgaattcttt
gctaaaagtttgcatatagtacttgaatctaggtgtcctttcgtgtcgtcgcgtaactat
agtggtgagcagatattgctttcaccttcgtcgtctggttcgtcgtcttctagtatgaga
cctagggataagtggtttaacttagctcttagggactgccctgccgcgttagaaaatatt
gatttttggagacagagtaatcttgagcccatggtggtggacgttgttttggttcagagg
cctgttaattgggattatggtattagttcgccgagagtagggtttgaaaggaaagagagg
tatccgtttggttggaaatcggattctgatgagtttgggtgtgatgggtgtagtgagaag
gttatcgagaggtgggttgtgcgttacgagagtaagaaaggttgtaaggaaggtggaacg
gggagtaagaggtctagctctacaagctcacatgcgttgtacaagaaatcaattttgctt
ttgagatcattgtatgttactgttaggcttttacctgcttataagattttccgtgagata
aattcgtctgggcagattcgaacgtttaatttaattcatagggtgtcttcttctgttgag
cctctgcttcgtagagacgaggctgaaatgcagccgtttatgttcaccccggtggacact
tcttgtgggaaactttgtatttcgttattgtatcttccttcgatttctgataccatttca
gagtcatctaccccgatgtccccacagttcataccagattatgtgggcagtccattggca
gatccattaaaaaggctaccatcagttccggtgccacaatattcaccatcatcttctcca
tttggaagacgtcatagctggagttatgatacttttagggcatctccaccttcggcattg
ccatcaccttcacccacgtattccgagtcacgaactttgcactctaaatttggccatcga
ccacctacgagctcacgttactcttcgttagaagcagctcaagttcctaccaaggatatg
ggatatgacgagtactttccatcgcctaacttttcaccatctcaatctccatcgccacct
atgtgtcttcagggaagtaatatgttgaaggttctcttacggtctgatagtgctcctgtt
tacatacccacttctaggcttggggatgcacctttatcccataagccggttttgccaccc
ttttctcctcctctcaaagctactagacctagtctttctttagtggagaaaagctcgggt
atgcaccagggtgccatagctactggcaagttgttatctctgcgggaagaagagatcgca
aggccatcgtctgtgaagatttcatctaacagctctccacacaaatctttttccagaagc
tttagtaggttatcatttgaagatagttatgatgactctgagttttcaggtccctttgtg
gtggatgatgatgaaatgatggatcacagtagcaggcctggttcatctgatcgatcagga
aatcttggcacaccgcatgaccgatcagggccattcacaccaagaaagtcacaagatgct
gcagttggtgctcttgttcagatgctgaaaaaagcaccgcctcttagacaagatttacat
cgatcacagaacgtttgtaaaccctcaaggcctgagaattcgtccagtcagatcaaagac
cagcctgttgttgaagttgctccttcaaatatgatatcttctagggtttctggcatcaag
accacatctgatgcattagaggagctgaaagtgtatatggacatgaaacaacttctgtta
aggcaatcaggcaagtcttag
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