Erigeron canadensis (horseweed): 122605922
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Entry
122605922 CDS
T07610
Name
(RefSeq) syntaxin-121-like
KO
K08486
syntaxin 1B/2/3
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
122605922
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122605922
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecad04147
]
122605922
Membrane trafficking [BR:
ecad04131
]
SNARE
Syntaxin (Qa)
Stx-PM
122605922
Exosome [BR:
ecad04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
122605922
Exosomal proteins of other body fluids (saliva and urine)
122605922
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
MutS_III
NPV_P10
DUF6366
Synaptobrevin
Ribosomal_L22e
Motif
Other DBs
NCBI-GeneID:
122605922
NCBI-ProteinID:
XP_043634819
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All DBs
Position
6:complement(20526060..20528105)
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AA seq
295 aa
AA seq
DB search
MNDLLSRSFSGGRVADIEMGNVASTGGNNLEKFFKDVDEIKQELKGLDHLHNQLQDSNEQ
SKTLYNASSIKTLRTKMDNDVALSLKKAKIIKNRLEALDRSNETNRNIPGCGPGSSTDRT
RISVVNGLRKQLQLSMKSFTELRQKMASEHRETIQRRYYTVTGENADDAKVDDLISTGQS
ETFLQKAIQQQGRGQVMETILEIQERHDAVTVLERNLKELHQVFMDMAVLVENQGEQLDD
IESHVNRANSFVRGGTQQLQVARRTQLNTRKWTCYGILLLLIIIGIVVISIRPWN
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacttgctttctcgatctttctctggcggccgtgttgctgatatcgagatgggc
aacgtggcttcaacaggcggtaataacctcgagaaattctttaaagatgtggatgagatc
aaacaagagttgaaaggtctagaccaccttcacaatcaactacaagattcaaatgagcaa
agcaaaaccttgtataatgcaagctcgatcaagacactgcgtaccaaaatggataatgat
gttgctttatctttaaaaaaagcgaaaatcattaaaaaccgtctagaggcattagatcgt
tctaatgaaacgaatcgcaacatccctggctgtggcccgggtagctctactgatcgtacg
cgtatctctgttgttaacgggctacgtaaacaacttcagttgtcaatgaagtccttcact
gaactacgacaaaagatggcgtcagagcatcgtgaaaccattcaacgaaggtactacacc
gtaactggggaaaacgcagacgatgctaaagtagacgacttgatctcaactggacaaagc
gagacatttttacaaaaagcaattcaacaacaaggaagaggacaagtgatggaaacaata
ctagaaatacaagagcgacacgatgcagtaacagtcttagagcggaacttaaaagaactg
catcaagtttttatggatatggcggttttggtcgagaatcaaggagaacagttggacgat
atcgagagccatgtgaacagagcgaattcgttcgtgagaggtggtacacaacagttgcaa
gtagcaagaaggactcaattgaacactaggaaatggacttgttatggtattcttttgttg
ttgattattattggcattgttgttatctcaattaggccatggaattag
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