Erigeron canadensis (horseweed): 122605965
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Entry
122605965 CDS
T07610
Name
(RefSeq) nuclear cap-binding protein subunit 2
KO
K12883
nuclear cap-binding protein subunit 2
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03013
Nucleocytoplasmic transport
ecad03015
mRNA surveillance pathway
ecad03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122605965
09122 Translation
03013 Nucleocytoplasmic transport
122605965
03015 mRNA surveillance pathway
122605965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122605965
03041 Spliceosome [BR:
ecad03041
]
122605965
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
122605965
Spliceosome [BR:
ecad03041
]
Common components
Common spliceosomal components
Cap binding complex
122605965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
DUF5721
Motif
Other DBs
NCBI-GeneID:
122605965
NCBI-ProteinID:
XP_043634864
LinkDB
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Position
6:37093474..37098119
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AA seq
255 aa
AA seq
DB search
MALLYKDVKKISAYRDRRFPGSQEEYEHALETSTTVYIGNMSFYTTEEQLYELFSRAGEI
KKIVMGLDKNTKTPCGFCFVMYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG
RGRSGGQVRDEYRTDYDPDRGGYGKLVQKELEEQRQVVDYGVGSLGSFQPPPMPRNYVRH
GGGDHGYRGSHRQGRGDYHRKRYRDDDRRGPEISKRNFEHESRRNSDHDSRQEKNPRFRE
HGDSDEEEDDRKRQK
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atggccttgctgtataaggatgtgaagaagatttcagcatatcgtgatagaaggtttcca
ggatcacaggaagaatatgagcatgcacttgaaacttcaacaaccgtctatattggcaac
atgtctttctatactactgaagagcaactttatgagctgttttctcgagcaggagaaatt
aaaaagattgttatgggtctggataagaacacaaaaacgccttgtggcttctgctttgtc
atgtattactccagggaagatactgaagatgctgtgaagtacattagtgggacaattctc
gatgatcgtcctattcgtgtagattttgattggggattccaggatggaaggcaatggggt
cgcgggcgaagtggtggacaggtgagggatgaatatcgcacggactacgatcctgataga
ggtggttatggaaaattggtgcagaaagagttggaagaacaaagacaggtagtagattat
ggtgttggatcgttgggatcttttcagccccctcctatgcctcgtaactatgtaagacat
ggaggtggtgatcatggctataggggctcccaccgacaaggcagaggagattaccaccga
aagagatatcgtgatgatgaccgccgtggcccagaaatctccaaaaggaattttgaacat
gaatctcgaagaaattctgatcatgattctagacaggagaaaaatccacgtttccgtgag
catggtgactcggatgaggaggaagatgaccgtaaacgacaaaaataa
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