Erigeron canadensis (horseweed): 122606040
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Entry
122606040 CDS
T07610
Name
(RefSeq) transcription factor E2FC-like
KO
K06620
transcription factor E2F3
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecad03000
]
122606040
Transcription factors [BR:
ecad03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, E2F
122606040
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Ortholog
Paralog
GFIT
Motif
Pfam:
WHD_E2F_TDP
E2F_CC-MB
TrmB
Cep57_MT_bd
LMBR1
DUF5917
PMD1-like
Motif
Other DBs
NCBI-GeneID:
122606040
NCBI-ProteinID:
XP_043634940
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Position
6:complement(3065476..3071395)
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AA seq
411 aa
AA seq
DB search
MSMSVATTAGGGGTKNNNNNPLSQSTTTKSVKRALERMQVQHQISLRHQPLPPPILPRFH
PHILFPPSNYNHIQNNYPNLPPPIAPKQTVICEPANTIPPVQGGVKAELTCNSSFQLLLC
DGAKKSRKIKTYAHAKSGNQEPNAESGDFNLPSACRYDSSLGLLTKKFVNLIHEDMDGML
DLNKAAVMLEVQKRRIYDITNVLEGVGLVEKATKNHIRWKGDKSESPRSLNTKLKKLKAE
LEHLYAEESKLDDCIRETQERLNSMEFDDYTQKHLYLTGEDFRNLPCLKNQTLIAVRAPH
ASCIEVPDPDQDSGFSEQQFELIVRSHTGPIGLYLISESEEQKESLNHTAQERDHPVNSQ
DQQMDLVSQSSVDSHYEIQKIIPSQNDVAHDYWFGSNLEVSATELWGMNVP
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgtcggtggcgacgacggccggcggtggcggtacgaagaataacaataataat
ccgttatcacaatcaacaactacaaaatcagtaaaaagagccctagaaagaatgcaagta
caacaccagatttcattacgtcatcaaccccttcctcctccgattcttccgcgatttcat
cctcatatccttttccccccttctaattataatcatattcaaaataattatcctaatctc
cctcctcctattgctccaaaacaaactgtcatatgtgagcctgcaaatacaatccctccg
gtccaaggaggcgtaaaagctgaattaacgtgtaattcttcatttcaattactgctatgt
gatggtgccaagaaaagcaggaaaataaagacctatgcacatgctaaatctggaaatcaa
gaaccaaatgctgagtctggtgatttcaatctacccagtgcttgtcgatatgatagttct
cttggacttctcacaaagaagtttgttaatttgatacatgaggatatggatggcatgctt
gatctaaacaaggctgcagttatgttagaggtccagaagaggagaatctatgatattacc
aatgttcttgaaggagttggacttgtagaaaaggctacaaagaatcacatacggtggaag
ggagataaaagtgaatcaccacgaagcctgaatactaaattgaaaaaattgaaggctgag
cttgaacatctgtatgctgaagaatccaagcttgatgattgcataagggaaacgcaagag
cgcttgaactctatggaattcgatgattatacgcaaaagcacctttatttgacaggagaa
gactttcggaatcttccatgtttgaagaatcagactctaattgccgtgagagcacctcat
gctagctgcattgaagttcccgaccctgatcaggatagtggtttctcagagcaacaattt
gaacttattgttagaagccatacaggcccaattggtctgtatcttataagtgaatcagag
gagcaaaaagaatcattgaaccatacagcacaagaacgtgaccacccagttaactcacag
gaccaacaaatggatctggtttcacaaagctcagttgactcccattacgagattcaaaag
attatcccatcacagaatgatgttgctcatgattactggttcgggtcaaatttagaggtc
agtgctaccgagttatggggtatgaacgtaccataa
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