Erigeron canadensis (horseweed): 122606042
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Entry
122606042 CDS
T07610
Name
(RefSeq) BUD13 homolog
KO
K13106
pre-mRNA-splicing factor CWC26
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122606042
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ecad03041
]
122606042
Spliceosome [BR:
ecad03041
]
Complex B
Other components
RES complex
122606042
Complex C
122606042
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bud13
Motif
Other DBs
NCBI-GeneID:
122606042
NCBI-ProteinID:
XP_043634945
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All DBs
Position
1:complement(45845714..45851567)
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AA seq
500 aa
AA seq
DB search
MVAPSSGSNSLKEYLKRYESNVDEEKKKKKKRKKTETKSDVNNVLIVDEPVWQKPVQVEV
EDDESQDEEKPQVNEDIEVKRIKRLEERKNRRPFGAISEDGSGWVPVSENANSLNSDDPN
SDISPPRKRRARNDTPSPGHELDPSRTVLNSDISPPHKQRNQNDTPSPEPHAHDMSPPRK
RRARFDTPSPEPNSDPDLSPPRKGRTRESLNSDISPPRNSRTRDSVNSDLSPPRRGQRRS
SNKSHPHASVVEDLSPPRKKSGNGHQQSIPATDLSPPRRTAKESERPKTGLVSGKYMKEE
IAKTKKADFLRFQNMDPSISGRGAEGVRRDKRTGQRMTKEQIESLQKKDEKPKEIKLEWG
KGLAQKREAEERWQELELEKSKPFARTRDDPDLDKMLKDTLRWGDPMAHLVKKKHSELVL
PDMGDNERMKESGFIVPQEVPKHSWLKRRLDAAPNRYGITPGRHWDGVDRSNGFEKQMFN
RKNEKQATEREAYLWSVADM
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggttgctccatcatcaggatctaactctctcaaggagtatttaaaaagatatgaaagt
aatgtagacgaagagaaaaagaagaagaaaaagagaaagaagaccgaaactaagtcggat
gtcaataatgttctcattgttgacgagccggtttggcaaaagccggttcaggttgaagta
gaagacgatgagtcacaagatgaagagaagcctcaagttaatgaagatatagaagttaaa
agaattaaacgattagaagagcggaaaaaccgacgcccatttggggctatttcagaagat
ggaagtggttgggttccagtctctgaaaatgctaatagtttgaactcagatgaccctaat
tctgatatctctcccccacgtaaacgtagagctcgcaacgatacaccttctccaggacat
gagctagatccttctagaactgtactaaattctgatatatctccaccccataaacaaagg
aaccagaatgatacaccttccccagagccacatgcgcatgatatgtctccacctagaaaa
cgaagggcacgtttcgatacaccatccccagaacctaactcagatcctgatctttctcct
ccccgcaagggtcggactcgcgagtcgctaaactcagatatttctcctcctcgaaacagc
cggacacgagattcggtaaactctgatctttctcctccacggcgtggtcaacgtcgatcc
tcaaataaaagtcacccacatgcatctgtagtggaagatctttcgcccccaaggaaaaag
agtggaaatggacatcaacaatcaattccagctactgacctttctccaccaagaaggact
gcgaaggaatctgagaggccaaaaactggtttagttagtggtaaatatatgaaggaagag
attgcaaaaacaaagaaggcagactttttgaggtttcaaaatatggatccttctataagt
ggtcgaggtgctgaaggcgtacgccgtgacaagagaacagggcaacgcatgacaaaggag
cagatcgaatctcttcaaaagaaagatgagaagccaaaggaaataaaattggaatgggga
aagggtctagctcaaaagcgggaggcggaagaaagatggcaagagttggaacttgagaag
tccaaaccatttgcaaggacaagagatgatcccgatcttgacaaaatgctgaaggacaca
ctgagatggggtgacccaatggcacatttagttaagaagaagcattctgagctggttctt
ccagacatgggagataatgaaaggatgaaagaatctggatttatagttcctcaggaagtt
cccaaacacagctggttgaagaggcggttagacgctgcaccaaaccgctatggtattaca
ccgggacgacactgggatggtgttgatcgtagcaacggttttgagaaacaaatgtttaat
aggaaaaatgagaaacaagcgacagaaagagaagcttacttatggtcggtagcagatatg
taa
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