Erigeron canadensis (horseweed): 122606067
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Entry
122606067 CDS
T07610
Name
(RefSeq) probable indole-3-acetic acid-amido synthetase GH3.1
KO
K14487
auxin responsive GH3 gene family
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
122606067
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Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
122606067
NCBI-ProteinID:
XP_043634963
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Position
6:complement(31233430..31236358)
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AA seq
600 aa
AA seq
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MAVGTVTSSPLGPPANEKDAKALQFIEEMTKNCDSVQENVLCEILTQNAEAEYLQKWNLG
GATDRKTFKSKVPVVSYDDLQPYIQRIANGDRSPILSSHPISEFLTSSGTSAGERKLMPT
IAAEMDRRQKLYSLLMPVMNLYVTDLDKGKGLYFYFIKAETKTPSGLVARPVLTSYYKSN
QFKTRPYDPYNVLTSPNETILCVDSFQSMYSQMLCGLIYREQVLRCGAVFASGLVRAIKF
LTLNWKQLALDIETGFLNPKITDQDIRACMSKILKPDPNLARFVRDECCDENWEGIITRI
WPNTKYLDVIVTGAMAQYIPILDFYSGNLPQTCTMYASSECYFGLNLTPMVKPSEVSYTI
MPNMGYFEFIPHDSANSVTKPNNDSPSQLLDLADLELGKEYELVISTYSGLCRYRVGDIL
RVTGFHNSAPQFKFIRRKNVLLSIDADKTDETELQSAIEKASELLKEFNTAVVEYTSYGD
TKTIPGHYVIYWELLVKDPGHGPSHQVLDQCCLAMEECLNSVYRQSRVADNSIGPLEIRV
VKNGTFEELMDYAISRGASINQYKVPRCVSFTPIMELLDSRVVSTHFSPSAPHWVPERRF
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggcagttggtacagtgacgtcatcaccattaggcccaccggctaatgagaaagatgca
aaagctcttcagtttatagaagagatgactaaaaactgtgattcggttcaagaaaatgtt
ttgtgtgaaattttgacacaaaatgctgaagctgagtacctacaaaaatggaaccttggc
ggcgccaccgaccggaaaaccttcaagtccaaggttccggttgtgtcgtacgatgatctc
cagccgtacatccaacgtatcgctaatggagaccgttctcctattctctcttcacacccc
atttctgagtttctcacaagttctgggacatcagctggggaaagaaagttgatgccaaca
attgctgcagaaatggaccgcaggcagaaattgtatagtctgctcatgcctgtcatgaac
ttgtacgtgaccgatttagacaaaggcaagggactatacttttatttcataaaggccgaa
acaaaaaccccaagtggtttagtagcccgacccgttctcacaagctactacaaaagcaac
caattcaaaacccgaccctacgacccatacaacgtgctcactagcccgaatgaaaccatc
ctttgtgtcgattcctttcaaagcatgtactctcaaatgctttgtggtctcatttatcgt
gaacaagtccttcgttgtggggccgttttcgcttccgggcttgttcgggccatcaagttt
cttacattgaattggaaacaacttgcccttgatatcgaaaccgggttcttgaaccccaaa
attactgaccaagatatccgggcttgtatgtctaaaattttgaaacctgacccgaacttg
gcccgtttcgttagggatgagtgttgtgatgagaattgggaagggataataacccgaatt
tggcccaatactaaatatcttgatgtcattgtgactggggctatggctcagtatattccc
atccttgatttttacagcggtaatttacctcaaacttgtaccatgtatgcctcatctgag
tgttactttgggttaaatttaaccccaatggttaaaccatctgaagtttcttataccatt
atgccaaacatgggttactttgagtttatcccacatgactcagccaactcggttactaag
cctaataatgactcaccgagtcaactccttgaccttgctgacctggaactcggaaaggag
tatgagctagtgatctcaacttactcgggtctctgtcgttaccgggttggtgacattctt
cgggtcactgggttccacaattctgccccacaattcaagttcattagaaggaagaatgtt
ttgctaagtattgatgctgataaaaccgacgaaaccgagctgcaaagcgccatcgaaaag
gcttctgagctgctgaaggagttcaacactgctgttgtggagtacacaagctatggggat
actaaaacaattccgggccattatgttatttattgggaattgttggtgaaagatccgggt
catgggccaagtcatcaggttttggatcaatgttgtttggctatggaagagtgtttgaat
tcagtttatagacaaagtcgggtcgcggataactcaattggcccgttggagattcgtgtt
gtgaagaatgggacttttgaagagttgatggactatgcaatctcacgaggcgcatcgata
aaccaatataaagttccgaggtgtgttagtttcacaccgatcatggagcttttagattcg
agggtcgtatcgacccattttagcccgagtgcaccacattgggttcccgaacgacgtttc
taa
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