Erigeron canadensis (horseweed): 122606108
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Entry
122606108 CDS
T07610
Name
(RefSeq) probable CoA ligase CCL5
KO
K10526
OPC-8:0 CoA ligase 1 [EC:6.2.1.-]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00592
alpha-Linolenic acid metabolism
ecad01100
Metabolic pathways
ecad01110
Biosynthesis of secondary metabolites
Module
ecad_M00113
Jasmonic acid biosynthesis
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09103 Lipid metabolism
00592 alpha-Linolenic acid metabolism
122606108
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Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
122606108
NCBI-ProteinID:
XP_043635008
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Position
6:complement(38877744..38880223)
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AA seq
564 aa
AA seq
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MDTTVEIPVSQSLVTGQRKRSGFDSQTGIYHSLDQLGNEHKIPTRANLDTATFVLSQFPE
PYQAELTVALIDSATGHKVTYAQLKQSIYSLATGLYYGLGVRKGDVIFVLSPNSILYPTI
CLAVFLVGGVLTTANPLNTASEIAKQVLDSGAKLAIVAPGETHKLVSTKVPALLTSRPSS
GDELSVEELIECCEPMELPETQSTQSDTAAILYSSGTTGVSKGVLLTHSNFISIMTLLKW
SNDKTSAKNDVFLCFIPMFHIYGLAFFALGLFCCGTTTVIMKKFDFKDMLEAIQVHKVNN
IPAVPPVILSLVKHNDGGYALSSLRRVGSGAAPLSKELVDRFRAKFPWVALRPGYGLTES
CGAATVFISNEEAKAHHAGSGALLPTFCAKVVDYETGKAMPPFGEGELWIKSPTVMKGYL
GNEEATAATIDSDGWLKTGDLCYFDEDGCLYIVDRLKELIKHNGYQVAPAELESILLGHP
EILDAAVIPLEDEEAGEVPMAYVVRAAGSQLGEDQVIQFVASQVAPFKKVKKVSFINVIP
KSAAGKILRKDLVAQSKLYVRSKL
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggacactacagtagaaatacctgttagccaatctctggtaacgggtcagagaaagagg
agcgggtttgactcccagacaggaatctaccactcactcgaccaactggggaatgaacat
aagattcctactagagccaaccttgatactgctacatttgtgttgtcacagtttccagaa
ccgtaccaagcagagttgactgtcgctcttatagattcggccacaggtcacaaagtcacc
tatgctcaactcaaacagtcaatctactcgttggcgactgggttgtactatggacttggt
gtccggaaaggtgatgtcatttttgtgttgtcacctaattcaatcctctacccaaccata
tgtttagcagtattcttggttggtggagtcctcaccacggctaacccacttaacaccgcg
tcagaaatagcaaagcaagtgctcgactcaggtgcaaaactagccatcgtggctccgggc
gagacccataaactggtgtcaactaaagtgcctgcccttctgacttctcgtccatctagc
ggagacgaactttcagtagaagaacttatagagtgttgtgaaccgatggagttgccagaa
acccagtcaactcagtcagacacagcggcaatattatactcctctgggaccactggagtg
agtaaaggggtactcctaacccattcaaacttcatatctatcatgacacttctaaaatgg
tcgaatgacaaaacttcggctaaaaatgatgtttttctatgtttcatacccatgtttcat
atctacggtcttgctttttttgctttgggcctgttctgttgtggtacaacaacagttata
atgaaaaaattcgactttaaagacatgctagaagcgatacaagttcataaggtcaacaat
attccggcagttcctccagttatactcagtctggtcaaacacaatgacggtggatatgcc
ttgtcgtctttgagacgagtggggtctggggctgcacccttgagtaaggaattggtggat
cggttcagagccaagtttccatgggtggcactgaggcctgggtatgggctaacagaaagt
tgtggggctgcaacggtatttattagcaatgaagaagctaaagctcatcatgctggttcg
ggagctttgctaccgactttttgcgctaaagttgttgattatgaaacaggaaaagctatg
ccccctttcggagaaggggagttatggataaagtcaccgactgttatgaaagggtattta
ggaaacgaggaagcaactgctgcaaccattgactcagatgggtggttgaagactggagat
ctttgttactttgatgaagatgggtgtctctatatcgttgatagactaaaggagctcata
aaacataacgggtatcaggtagctccagcagaactggaatccatactactcggccatccc
gaaatacttgatgcagcagttataccacttgaagatgaagaggcaggagaggtacctatg
gcatatgtagtgagagcagctggatcacaactcggtgaagaccaagtcattcaatttgtt
gccagtcaggtggctccattcaagaaggtgaagaaagtttccttcataaacgtaatacca
aagtcagctgcaggcaagatattgcgaaaggatttagtagcacaaagcaaactgtatgtt
cggtcaaaactttga
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