Erigeron canadensis (horseweed): 122606243
Help
Entry
122606243 CDS
T07610
Name
(RefSeq) cell division cycle 20.5, cofactor of APC complex-like
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122606243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122606243
03036 Chromosome and associated proteins [BR:
ecad03036
]
122606243
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
122606243
Chromosome and associated proteins [BR:
ecad03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
122606243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML
Beta-prop_WDR19_1st
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
eIF2A
Beta-prop_RIG_1st
RMC1_N
KNTC1_N
Beta-prop_VPS8
Beta-prop_SCAP
Beta-prop_NWD2_C
Beta-prop_Vps41
WDR54
PorZ_N_b_propeller
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-GeneID:
122606243
NCBI-ProteinID:
XP_043635138
LinkDB
All DBs
Position
6:42550317..42552718
Genome browser
AA seq
463 aa
AA seq
DB search
MVLLNLELNSDPLKDWKLQSDWYSPTRLHNSPVVYDFPGDRFIPNRSLMDLDQACSLLTN
RTNYPTKCNFGAKYRKIMEENLTLDSEGRPFRMLAFRGSPKFSRKSIRYIDELRRSDEEN
LNNISEHPIQQRKFQRRETRILDAPLLQDDFYMNVMDWGKNNILAIGLGRDVYLWNATNR
SIHHIYKSDHVNDHPSSISWSQDSKMLAVGHARSEIDIWDAHASKIIKTLKGHTKMVGAT
SWNGHILTSGSRKAILNHDVRARNTLVSSVKAHRSTVCGLKWSMNGNLLASGGDDNVVYI
WEASQMNSARFVHRFTNHVAAVKALAWCPYNYEVLASGGGSQDGCIKLWNTQKGTCITSV
NTEAQICGLEWNRHYKEIASAHGYSFNHERKNALSLWRYPSMVKVGDIRSHQSRVLQLSQ
NPDGLTLVSAGADETLRFWEFFGPPPPAKRPCSVLSLKALHIR
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggtgttattgaacctggaattgaattcagacccattaaaagattggaagttgcaatca
gattggtactctccaactcgccttcacaacagtcctgttgtttacgatttcccgggcgat
cggtttatacccaacaggagtttgatggatcttgatcaagcctgcagcctgttgaccaac
agaaccaattatcccaccaaatgcaatttcggtgcaaaataccgaaaaataatggaggaa
aatctgactttagatagtgaaggaagaccctttagaatgcttgcttttagaggaagtccg
aaattcagtagaaagtcaattcgatatattgatgagcttcgtcgtagtgatgaagaaaat
ttgaacaacataagtgagcatccaatccaacaaagaaaatttcagcggagagaaaccaga
atactagatgcaccacttctccaagacgatttctatatgaatgtaatggattgggggaag
aacaacattcttgcgattggactgggacgagatgtgtacttatggaatgctacgaataga
agcatacatcatatatataaatcggatcacgtgaatgaccatccttctagtatttcatgg
tctcaagacagcaaaatgctggcggtgggtcatgcacgctcagagatcgatatatgggac
gcacacgcatccaaaattatcaaaacactaaaaggtcataccaaaatggtaggagcaact
tcatggaatggtcacatattaacatcaggcagtagaaaagccattttgaatcatgatgtt
cgggctagaaacactttggtatcatctgtaaaggcgcacagaagtacagtgtgtggcttg
aaatggtcaatgaatggtaacttactggctagtggcggtgatgataatgttgtatacata
tgggaagcgtcacagatgaactcagccaggttcgtgcaccggtttacaaaccatgttgct
gcagtgaaggctttagcttggtgcccttataattatgaagtgctggcctctggtggtggt
tcacaagatgggtgcattaagttatggaacactcaaaaagggacttgtattactagtgtc
aacacagaagcacagatttgtgggctagaatggaacagacattataaggagatagcaagt
gcacatgggtatagcttcaatcatgaacgtaagaacgcactgtcactgtggaggtaccct
tcaatggttaaagtgggtgacataaggagccaccagtctcgagttttgcagctgtctcag
aaccctgatgggttgacattggtgtcggctggtgctgatgaaacacttcggttttgggag
tttttcgggccaccgccaccagctaagaggccatgcagtgtcctgtcgttaaaggcactc
catataagatag
DBGET
integrated database retrieval system
