Erigeron canadensis (horseweed): 122606288
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Entry
122606288 CDS
T07610
Name
(RefSeq) protein argonaute 1-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122606288
03036 Chromosome and associated proteins [BR:
ecad03036
]
122606288
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
122606288
Chromosome and associated proteins [BR:
ecad03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
122606288
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
122606288
microRNA pathway
RISC loading complex
122606288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Gly-rich_Ago1
Motif
Other DBs
NCBI-GeneID:
122606288
NCBI-ProteinID:
XP_043635183
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All DBs
Position
6:6441895..6451255
Genome browser
AA seq
1101 aa
AA seq
DB search
MVRKRRTDGASGGESSEPQEAGTGQASGAAQRPPAQQQPQQQMGGGYQGRGQGGYQGRGQ
QGGGYQGRGQQGGGYQGRGQQGGGYQGGQGGYQGGGQPQGGRGYVQRGGYGGGGGRGPQR
GGGPQQYYGGPHDQPQQGQQPRPPRETAPPQHRGGSSYAGGPSRPSVPELYQATQAPQQP
VATLQPVVQAESSSSTEQMVDESMDQFKQLSLQQEEPIQGAPASSKSLRFPLRPGKGSTG
TRCMVKANHFFAELPDKDLHQYDVTINPEVTSRGVNRAVMAQLVTLYRDSHLGKRLPAYD
GRKSLYTAGPLPFVSKEFKITLLDEDDGAGGTRRERDFKVVIKLASRADLHHLEMFLAGR
QADAPQEALQVLDIVLRELPTNRYSPVGRSFYSPHLGRRQPLGEGLESWRGFYQSIRPTQ
MGLSLNIDMSSTAFIEPLPVIEFVAQLLNREVSARPLSDADRVKIKKALRGVKVEVTHRG
NMRRKYRISGLTSQATRELNFPVDDRGTMKSVVEYFRETYGFSIKHVQWPCLQVGNTQRP
NYLPMEVCKIVEGQRYSKRLNERQITALLKVTCQRPQEREGDILKTVRHNAYGQDPYAKE
FGIKISTNLASVEARILPPPRLKYHDTGRERDCLPQVGQWNMMNKKMVNGGTVANWICIN
FAQNVQDNIARAFCSELAQMCNTSGMSYNPEPVLPAFSGRSNQVERVLKARFHEAMTKLQ
TTNKKELDLLIVILPDNNGTLYGDLKRICETDLGIVSQCCLTKHVFRMSKQYLANVALKI
NVKVGGRNTVLVDALSRRIPNVSDVPTIIFGADVTHPHPGEDTSPSIAAVVASQDWPEIT
KYAGLVCAQTHRQELIQDLYKEWEDPNRGKVSGGMIKELLVSFRRATGRKPERIIFYRDG
VSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHNDRNSVDRSG
NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFSADDLQSLTNNLCY
TYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSMISGAAGRGMGAGGRNTRVPGT
NAAVRPLPPLRENVKRVMFYC
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atggtaagaaagaggagaacagatggtgccagcggaggtgaaagctctgagccccaggag
gctggtactggacaagctagtggtgctgctcaaaggccacccgcacaacagcaaccacag
caacaaatgggtggtggttatcagggacggggacaaggtggctatcaaggaagagggcag
cagggtggtggctatcaaggaagagggcagcagggtggtggctatcaaggaagagggcag
cagggtggtggttatcaaggaggacaagggggttatcaaggtggaggacagcctcaagga
ggaagaggttatgttcagaggggtggttatggtggtggtggtggtagagggccacaacgt
ggtggtggtccccagcagtattatggcggacctcatgaccaaccacaacaaggtcaacaa
ccaaggcctccaagagaaactgctccacctcaacatcgtggtggatcttcgtatgctggt
ggaccttctaggccatcagttcccgagctgtaccaagcaacgcaagctcctcagcagcct
gtggcaacattgcagcctgttgttcaagcagagtcttcgtcttcaacagaacagatggta
gacgagtcaatggatcagtttaagcagctctcgctgcagcaagaagagcctattcagggc
gcacctgcatccagcaaatcattgaggtttcctttgcgtccaggaaagggtagtactgga
accaggtgcatggtgaaggctaaccacttctttgctgaactgcctgataaggatttacac
cagtatgacgtgacaatcaatccagaggtgacatcacgcggtgttaatcgtgctgtaatg
gcacagttggtgacattgtacagggactctcatcttgggaagaggcttcctgcatatgat
ggaagaaagagtttgtatactgctggtcctcttccctttgtttccaaagagttcaaaatc
actcttctagacgaagatgatggcgcaggcggcaccaggagagaaagagactttaaagtt
gtgatcaaactagcttctcgtgctgatctgcatcacttggaaatgtttttagcagggaga
caagcagatgctccacaagaagcgcttcaggttctggatattgttttaagggagttgccc
actaatcggtattctccagtgggacggtcattctattctcctcatttaggtcgtaggcaa
ccactcggtgaagggttggaaagctggcgtgggttttatcagagcatacgacctacacag
atggggctgtccctaaatatcgatatgtcttccactgcgttcattgagccattgcccgtg
attgagttcgtcgcgcagcttctaaatagggaagtttcggcaagaccactatctgatgct
gaccgtgtgaagatcaaaaaggcactgagaggggtcaaggttgaagttactcaccgggga
aatatgcgtaggaagtatcggatatctggtttgacatctcaggctacgcgggaattaaac
tttccagttgatgacagaggtacaatgaaatcggtagttgaatacttccgggagacttat
ggcttttcaatcaaacatgtacaatggccgtgcttgcaagtcgggaatactcagagaccc
aattatttgcctatggaggtctgcaagatcgtggagggccagaggtattcgaagaggcta
aatgagcgacaaattactgcccttcttaaggtcacatgtcaacgccctcaggaaagagag
ggtgatattctcaagactgtcaggcacaatgcttacggacaggatccttatgcaaaggag
tttgggataaaaattagcacaaacctagcctctgtcgaagcacgaatattgcctcctccc
cggcttaagtatcacgatacgggtcgtgaaagggactgtctgcctcaagttggtcaatgg
aatatgatgaacaagaaaatggttaatggtggaacagttgccaactggatctgcataaac
tttgcgcagaacgtgcaagataatattgcgcgtgctttttgttcagagctggcacaaatg
tgtaatacttctggcatgtcatataatcctgagcctgtgcttcctgcctttagtggtcgt
tctaatcaggtcgagagagttttgaaagcccgatttcatgaagccatgactaaacttcag
accaccaacaagaaggaacttgatttgctcatcgtcattctgccagacaacaatggcaca
ctttatggtgacttgaagaggatctgcgagactgatcttggcatcgtttctcagtgctgt
ctaacaaagcatgtctttaggatgagtaagcagtaccttgccaacgtggcattaaaaata
aatgtcaaggttggtggaaggaatactgttctagttgatgcattgtcgaggagaattcct
aatgtcagtgatgttcccacaatcatttttggtgctgatgtcactcatccacaccctgga
gaagatacaagcccttcgattgcagctgttgtagcttctcaagattggcccgagattacc
aagtatgcggggttggtttgtgcacaaactcaccgccaagaactcattcaagatctatat
aaggaatgggaagatccgaatagaggcaaagtgtcgggtggcatgataaaggaactcctt
gtatctttccgtcgagcaactgggcgaaaaccagagcgtattatcttctacagggatggt
gtgagtgaaggacagttttaccaagtcctactgtatgaacttgatgcaattcgtaaggct
tgtgcttcattggaacctaattatcagcctccagtcacatttgttgtggttcaaaaacgg
catcacactagattgtttgctaacaaccacaatgatcgtaattctgtggacaggagtgga
aatatactgccaggcacagtagttgattccaagatttgccatcctacagagtttgatttt
tatttatgtagccatgctggcattcagggtacaagtcgtcctgcccattaccatgtttta
tgggatgagaacaagttttcagctgatgacctgcaatcactcacaaataatctctgctac
acttatgcaaggtgtacacgctctgtgtctattgtacccccagcatattatgcgcatctg
gctgctttccgagcaaggttttacatggaaccagatacatctgacagtgggtccatgatc
agtggtgctgctggacgtggtatgggagcaggtggtagaaacactcgtgtgccaggcaca
aatgcagctgttagacctctccctcccctcagggaaaatgtgaagcgggttatgttctat
tgctag
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