Erigeron canadensis (horseweed): 122606566
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Entry
122606566 CDS
T07610
Name
(RefSeq) oligouridylate-binding protein 1B-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122606566
03041 Spliceosome [BR:
ecad03041
]
122606566
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
122606566
Spliceosome [BR:
ecad03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
122606566
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_5
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
122606566
NCBI-ProteinID:
XP_043635341
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All DBs
Position
7:2063417..2070608
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AA seq
424 aa
AA seq
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MQHHQRVKQQQQQQQALMQQALLQQQSLYHPGLLPPPQIEPILSGNLPPGFDPNTCRSVY
VGNVHTQVTEPLLQEVFASTGPVEGCKLIRKDKSSYGFIHYFDRRSAALAILSLNGRHLF
GQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDAMLFTCFSAYASCSDARVMWDQKTG
RSRGFGFVSFRDQQDAQSAINDLTGKWLGSRQIRCNWATKGAGTSDETQGSDSKNVVELT
NASSEDSKEVANNDAPENNPQYTTVFVGNLAPEVTQLELHRHFYSFGAGVIEEVRLQRDK
GFGFVRYNNHAEAALAIQMGNNQSVLYGKQIKCSWGSKPTPPGTSSNPLPEPAPAPMLSA
ADLLAYERQLAMSKMAGVHALMHPQSQHPLKQATMGMGAAGASQAIYDGGYQSIGAAQQL
MYYQ
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcaacatcatcaaagggtgaaacaacaacaacaacaacaacaagcattgatgcaacag
gctctcctccaacaacaatctctttatcatcctggccttttacctccaccccagattgaa
cctatattaagtggaaatctgcctcctgggtttgatccaaatacatgccgcagcgtgtat
gtgggcaatgttcatacacaagtgaccgaaccacttcttcaagaggtttttgcaagtact
ggtcctgttgaaggatgcaaactcataagaaaggataagtcatcttatggattcattcac
tacttcgatcgtagatcagccgcacttgctattttgtcactaaatggaaggcatttgttt
ggacaacctatcaaagttaattgggcatatgccagtgggcagagggaggatacctcaggt
cactttaacatatttgttggtgaccttagccctgaggttacagatgcaatgctctttaca
tgcttctctgcctatgctagttgctcggatgcgagggttatgtgggatcaaaaaacgggg
cgctcacgtggtttcggtttcgtttctttccgagaccaacaggatgctcaaagtgctata
aatgatttaactgggaagtggcttggcagcaggcagatacgctgcaactgggccacaaaa
ggtgctggtacgagtgatgaaacacagggttcagattctaaaaacgtagtggagctaact
aatgcatcttcagaggatagtaaagaggtagctaacaatgatgcacctgagaataaccca
cagtatacgaccgtctttgttggtaacctcgctccagaagttacccagcttgagcttcat
cgtcacttttattcgtttggtgccggtgtaatcgaggaagtcaggttgcaacgtgataaa
gggtttggttttgtgaggtacaataatcatgccgaagcggctcttgccattcaaatgggc
aacaaccagtcagttctttatggtaaacaaattaagtgctcatggggtagtaagcccact
cctcccggaacaagctcaaatccattacctgaacccgcacctgcaccaatgttgtccgct
gctgatttgttggcatatgaacgccaactagcaatgagtaagatggcaggggtccatgct
ctaatgcaccctcaatcccagcatcctcttaaacaagcaacaatgggaatgggtgctgct
ggagccagccaagccatatatgatggtggttatcagagcatcggtgccgcccaacaactc
atgtactatcagtga
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