Erigeron canadensis (horseweed): 122606571
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Entry
122606571 CDS
T07610
Name
(RefSeq) farnesyl pyrophosphate synthase-like isoform X1
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00900
Terpenoid backbone biosynthesis
ecad01100
Metabolic pathways
ecad01110
Biosynthesis of secondary metabolites
Module
ecad_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
122606571
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ecad01006
]
122606571
Enzymes [BR:
ecad01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
122606571
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
122606571
Prenyltransferases [BR:
ecad01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
122606571
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
GPAT_C
Motif
Other DBs
NCBI-GeneID:
122606571
NCBI-ProteinID:
XP_043635347
LinkDB
All DBs
Position
7:9466256..9473411
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AA seq
344 aa
AA seq
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MSSSIDTKSKFMQVYEILKFELIHDPCFEFDHDSRQWVDQMLDYNVPRGKLNRGLSVVDS
YKLLKGEELTEDEFFLACALGWCIEWLIAYAMVLDDIIDESHTRRGQPCWFRLPKVGMIA
VNDGLVLRNHIARILKKHFRGKPYYVDLLDLFNEVEFQTASGEMIELITTLAGEKDLSKY
SLSIHRRIVQYKTGFCSFYLPVACALLMFGEDLDDHVQAKDILVEMGTYFQTQDDYLDCF
GAPEITGKIGTDIEGFKCSWLVVKALELSNEEQKKLLHENYGKKDPTSIVKVKELYHALN
LQVVFEDYEKTMHEKLIKSIEAHPSKAIQAVLKSYLGKIYKRQK
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcagtattgatacgaaatccaaattcatgcaagtttatgaaattcttaaattt
gagctaatccacgatccttgttttgagtttgatcatgattctcgtcaatgggttgaccag
atgcttgactacaatgtacctagaggaaagttgaacagaggcctctctgttgtcgacagc
tacaagttactaaaaggagaagaactgacagaagatgaattttttcttgcatgtgccctt
ggttggtgcattgaatggcttatcgcgtatgctatggtacttgatgacattatcgatgag
tcccatactcgtagaggtcaaccctgttggttcagattacccaaggttggtatgatcgct
gtaaatgatggacttgttcttcggaatcatattgctagaatcttaaagaaacatttccga
gggaagccttactatgtggatctactggacctcttcaatgaggtagagttccaaacagct
tctggagagatgatagaattgatcactacacttgctggagagaaagatctctctaagtat
tctttgtcgattcaccgccggattgttcagtacaaaactggtttttgttcgttttacctt
ccagttgcgtgtgcactccttatgtttggagaggatctggatgatcatgttcaagcgaaa
gacatccttgttgaaatgggtacctattttcaaactcaggatgattatcttgattgtttt
ggtgctcctgagattactggcaagattggaacagatattgaaggcttcaagtgttcatgg
ttggttgtaaaagcattagaactttccaatgaggaacaaaagaaacttctacatgagaac
tatggtaaaaaggatccaactagcatagtaaaagtgaaagaactttaccacgctcttaac
cttcaggttgtgttcgaagattacgagaagacaatgcatgagaagttgatcaaatcgatt
gaagctcacccgagcaaagcaatacaagctgtgttgaaatcttacctgggaaagatatat
aagaggcaaaagtag
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