KEGG   Erigeron canadensis (horseweed): 122606631
Entry
122606631         CDS       T07610                                 
Name
(RefSeq) squalene synthase-like
  KO
K00801  farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21]
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad00100  Steroid biosynthesis
ecad00909  Sesquiterpenoid and triterpenoid biosynthesis
ecad01100  Metabolic pathways
ecad01110  Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09100 Metabolism
  09103 Lipid metabolism
   00100 Steroid biosynthesis
    122606631
  09109 Metabolism of terpenoids and polyketides
   00909 Sesquiterpenoid and triterpenoid biosynthesis
    122606631
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:ecad01006]
    122606631
Enzymes [BR:ecad01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.21  squalene synthase
     122606631
Prenyltransferases [BR:ecad01006]
 Terpene biosynthesis
  Squalene/phytoene synthase
   122606631
SSDB
Motif
Pfam: SQS_PSY
Other DBs
NCBI-GeneID: 122606631
NCBI-ProteinID: XP_043635405
LinkDB
Position
7:4618191..4624308
AA seq 419 aa
MGSIMKAVIKNPDDFFPLLKLKIASKKAEKQIPTEPHWGFCYSMLIKVSRSFALVIQQLN
PQLRDAVCIFYLVLRALDTVEDDTSIPADIKVPILKAFHQHIYDRDWHFACGTKEYKVLM
DQFHHVSTAFLELKKDYQEAIEDITMRMGAGMAKFICKEVETTDDYDEYCHYVAGLVGLG
LSKLFHASGTEKLFPDSISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNK
LEDLKYEENSEKAVQCLNDMVTNALIHIEDCLEYMCQLRDPAIFKFCAIPQIMAIGTLAL
CYNNVEVFRGVVKMRRGLTAKVIDRTKTMGDVYQAFYDFSSILKSKVDMHDPNAKTTITR
IEAAQKICMDSGTFSNRKSYIVKNEPSYSPALIALLFIIMAIIFAYLSANRPNKIKVTL
NT seq 1260 nt   +upstreamnt  +downstreamnt
atggggagtataatgaaggcagtaataaagaatccagatgatttctttccattattgaag
ttgaaaatcgcatcaaagaaagccgagaaacagatcccaacggaaccgcactggggtttt
tgttactctatgctgattaaggtttctagaagcttcgctctcgttattcaacaactcaat
ccccaacttcgtgacgctgtgtgcattttttacctggttcttcgtgctcttgacaccgtt
gaggatgatacaagcatacctgctgatattaaagtacctattctgaaggcctttcatcaa
catatctatgatcgagactggcactttgcatgcggtacaaaggaatacaaggttctcatg
gaccagttccaccatgtctctactgcctttctagagcttaagaaagattatcaggaggca
atagaggatataaccatgaggatgggtgcagggatggcgaagtttatatgtaaagaggtt
gagacaactgatgattatgatgaatattgtcactatgttgcggggcttgttggattaggg
ttgtcaaagctcttccatgcttcgggcacagagaagttgtttccagattccatctccaat
tcaatgggtttatttctccagaaaacaaacattatcagagattatctggaggatataaat
gagatacccaagtcacgcatgttttggcctcgtgagatctggagtaaatatgtgaataaa
ctagaggacctgaagtatgaagagaactccgagaaggccgttcagtgtctgaatgatatg
gtgacaaatgcattaatccacattgaagactgtttggagtatatgtgtcagttgcgtgat
ccagccatcttcaaattttgtgctatacctcagattatggcaatcggaacactagcttta
tgctacaacaatgttgaagtgttcagaggtgttgtgaaaatgagacgtggtcttacagca
aaagtaattgatcggactaaaacaatgggagatgtgtaccaggctttttatgatttttct
tctattctcaagtccaaggtcgacatgcatgatcctaatgccaaaacaacaatcaccagg
atagaagcagctcagaagatctgcatggactcgggcacctttagtaacaggaaatcttac
atagttaagaacgagccaagctacagtccagctctaattgctctgcttttcatcataatg
gccatcatttttgcatatctttctgctaatcgacccaataaaatcaaagtcactttgtaa

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