Erigeron canadensis (horseweed): 122606638
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Entry
122606638 CDS
T07610
Name
(RefSeq) ABC transporter A family member 1
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122606638
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecad02000
]
122606638
Transporters [BR:
ecad02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
122606638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
ABC2_membrane
AAA_29
RsgA_GTPase
nSTAND3
EutK_C
Motif
Other DBs
NCBI-GeneID:
122606638
NCBI-ProteinID:
XP_043635410
LinkDB
All DBs
Position
7:complement(26859059..26873060)
Genome browser
AA seq
1886 aa
AA seq
DB search
MEEKKMNNSSSNTSSSGRQLKTMLRKNWLLKIRHPYITLSEILLPVVVMLMLIAVRTQVD
TKIHPAQSYIKKDTYVEVGKSDISPTFNQVLESLFANGEYLAFAPNTSDTRTMINVLSYK
FPLMKLVTKLYKDELELEMYLKSNTYADCSEVKNCSHPKIKGAIVFHGQGPYLYDYSIRL
NHTWAFSGFPDVKSIMDINGPYLNDLELGLNQIPILQYGYSGFLTLQQVMDSYIIFYAQQ
KETNLVSENAIDPLKTPWSQFTPSTITIAPFPTREYTDDEFQSIIKEVMGVLYLLGFLFP
VSRLISYSVFEKEQKIQEGLYMMGLKDEIFYLSWFITYAVQFALSAAIITVCTIGTLFQY
SDKSLVFMYFFLFGFSAIMLSFLISTFFTRAKSAVAVGTLTFLGAFFPYYTVNDEAVSMV
VKIVASLLSPTAFALGSVNFADYERAHVGLRWSNIWRASSGVCFLVCLVMMIFDSILYFA
IGLYLNKVLHKENGFVYPWNFIFPKGFWRKKSTSRQFFSSLESNSDEHSQEKCSSRSTME
AISLDMKQQEVDGRCIQVRNLHKVYRSNKGECCAVDSLQLTLYENQILALLGHNGAGKST
TISMLVGLLAPTSGDALVFGKSILTDMKDIRKNLGVCPQYDILFPELTVKEHLEIFANIK
GVNEESLEHIVTEMADEVGLADKLNAVVSALSGGMKRKLSLGIALIGDSKVVILDEPTSG
MDPYSMRLTWQLIKRIKKGRIILLTTHSMDEADILGDRIAIMANGSLKCCGSSLFLKHQY
GVGYTLTLVKTSPGASAAADIVYKHIPSATCVSEVGTEISFKLPLVSSASFENMFREIES
CISKSDPHIASLEHEGPSDFGIESYGISVTTLEEVFLRVAGCDISEVDGMEGSVLPNSTP
AQTSDDYVEEKTSKSKLFGSYIVIFGILFSMVGRACTLFLDAALSLLNFLSMHCCCPSFI
TRSTFWKHSKALLIKRWISARRDRKTIVFQLLIPALFLFIGLLLLELKSHPDQPSITFTT
SNFNPLLSGEGGGGPIPFDLSLPIAREVSHYIEGGWIQIFKESSYRFPDPNTTLEDAIEA
AGPTLGPILLSMSEYLMSSFNESYESRYGAIVMHPQKDDGSIGYTVLHNSTCQHAAPTFI
NLMNAAILRLATLDKNMTIQTRNHPLPMTESQRLQRQDLDAFSAAIIVSIAFSFIPASFA
VPIVKEREIKAKHQQLISGVSILSYWISTYIWDFISFLVPSSFAMVLFYIFGLEQFIGSG
SLLPTVLILLEYGAAIASSTYCLTFFFSEHSMAQNVVLLAHFFTGIILMVMSFIMGLIPA
TQDLNSFLKNFFRLSPSFCFADGLASLALLRQGMKVGSNNGYFGWNVSGGSICYLAAEGI
IYFLLTLGLEIFPPHKLSFFAIKDFLRSFRRTSPTFSDAYSEPLLRSSTESAAIDLDEDI
DVRTERSRVLSGSIDKAIIYLRNLRKVFPGGRNHGKKVAVHSLTFSVQEGECFGFLGTNG
AGKTTTLSMLSGEVCPSAGTAFIFGQDMRLNPKAASQLIGYCPQFDALLEFLTVQEHLEL
YARIKGVPDYLLDNVVMDKLLEFDLLRHASKQSFTLSGGNKRKLSVAIAMIGDPPIVFLD
EPSTGMDPIAKRFMWEVISRLSTRSGKTAVILTTHSMNEAQALCTRIGIMVGGKLRCIGS
PQHLKTRFGNHLELEVKPTDVSSVDLENFCQMIQERLFDFPSHPRSIFGDLEVCIRGDDS
ITSEDALATEISLSRDMIILIGRWLGNEESIRTLTNNHGSGGSSNEQLTEQLARDGGLPL
PIFSEWWLAKEKFSMIDSFVVASFPGATSQGCNGLSVKYQLPRGEDFSLADVFGLIEQNR
NRLGIAEYSISQSTLETIFSHFAANP
NT seq
5661 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaagaaaatgaataacagtagcagcaataccagttcttctggaaggcagctc
aaaactatgctccgcaaaaactggcttcttaaaattcgtcatccttacatcactctctct
gagattctgcttcctgtagtggtgatgctgatgttaatagccgtaaggacacaagttgac
acgaagatccatcctgctcaatcgtacattaagaaagatacatatgtggaagtcgggaag
agtgatatctccccaacttttaatcaagtgctggaatcattgtttgctaatggtgaatat
ttggcttttgcccctaacacgagtgatacaaggacaatgataaacgttttgtcatataaa
ttcccattgatgaagctggttacaaaactatacaaagatgaactagagctggagatgtat
ctaaaatcaaatacctatgctgattgcagtgaagtaaagaattgttcacatccaaaaatc
aaaggagcaatagtgtttcatggacaaggtccttacttatatgactatagcattcggctc
aaccacacatgggctttttcaggatttccggatgtaaaaagcatcatggatataaatggc
ccgtatcttaatgacttggaattgggccttaatcagataccaattttgcagtatggctac
agcgggtttttaactctccaacaggttatggattcgtatattattttttatgcccaacaa
aaggaaactaatttagtaagtgagaatgcaatagacccactcaagacaccatggagtcaa
ttcacaccatcaaccataacgatagctccatttccaactcgtgaatatactgatgatgag
ttccagtccatcatcaaggaggtgatgggggtcctgtacttattagggtttctttttcca
gtttctcgcctgataagctattcggtttttgagaaggagcagaaaatacaggaagggctt
tacatgatgggactgaaggatgagatattctatctttcgtggtttattacatatgctgta
cagtttgcactttcagcagcaatcatcactgtttgtacaataggcacactctttcagtac
agtgataagtcattggtgttcatgtatttctttctgttcgggttcagtgccataatgcta
tcatttctgatctctactttcttcacacgagcaaaatcagctgtagcagttggaactctt
acttttcttggcgctttctttccctactacacagtgaatgatgaagctgtttctatggtt
gtaaagatagtagcttctttgctttcacctacagcatttgctttaggctccgtcaatttt
gctgattatgagcgtgcacatgttggacttcgttggagcaacatttggcgggcgtcttct
ggagtgtgctttttagtctgtctcgttatgatgattttcgactctatattgtattttgca
attggcctttatctgaacaaggttcttcacaaggagaatgggtttgtgtacccatggaac
ttcatcttcccaaaaggcttttggaggaaaaaaagtaccagtagacaatttttttccagc
ttagaaagtaacagtgatgagcattctcaagaaaagtgttcttctcgatcaacaatggaa
gcaataagcttagatatgaaacaacaagaggtggatggcagatgcatccaagttaggaat
ctgcacaaggtatatcgtagcaacaagggagagtgttgtgctgttgattctctacagctt
acattatatgaaaaccagatacttgcacttctcggacataatggtgctggcaagagtacc
acaatctccatgcttgttggccttcttgctccgacttctggagatgctttagtttttggc
aaaagtatcttaacggacatgaaggacataaggaagaatttaggtgtttgcccccagtat
gacatccttttcccagagttgacggtgaaggaacatttggaaatttttgctaatataaaa
ggagtgaatgaggaatctctggagcacattgtaactgaaatggctgatgaagtgggtttg
gcagataagcttaatgctgttgtaagtgctctttctggaggcatgaaaaggaagttgtcc
cttggcatagcattgattggagatagtaaggttgttattcttgatgagccaaccagtgga
atggatccatattcaatgcggttgacatggcagctcataaaaagaataaagaaaggcaga
ataatattattaaccacacactcgatggatgaagcagatatacttggagaccggatagct
attatggccaatggttctttgaaatgctgtggaagttctctctttttgaagcaccaatat
ggggttggctatactcttactttggtgaagacttcacccggggcctctgcagctgctgat
attgtttacaagcatattccatcagcaacatgcgtgagcgaggttggcaccgagatttca
ttcaagcttcctctagtatcatccgcttcttttgagaacatgtttagggaaattgaaagc
tgcatatcaaagtcagatccacatatagcaagcttggaacatgaaggccccagtgacttt
ggtatagaaagttatggaatatctgtcacgactttagaggaggttttcttaagagttgca
ggatgtgacattagtgaagtagatggcatggagggaagtgttttgcccaactctactcct
gctcaaacatctgatgattatgttgaagaaaaaacatcaaagtccaaactttttggaagt
tatatagttatcttcgggatactgttttcaatggttggcagagcttgtactcttttcctt
gatgcagccttgagcttgttaaattttttgagcatgcattgctgttgcccttccttcatt
acaagatcaacattctggaaacattcaaaagcgttgcttataaagagatggatatctgca
aggagagacagaaaaacaattgtttttcagctgttaattcccgctctttttttgtttatt
ggtcttcttcttctcgaactaaagtcacatcctgatcaaccctccataaccttcacaact
tccaactttaatccactacttagtggtgaaggtggtggtggtcctattccttttgatcta
tcattgcctatagcacgggaggtttcgcattatatagaagggggctggatccagattttt
aaagagagctcatataggtttcctgatcctaatacaacattagaagatgctattgaggca
gcagggcccactttgggcccgatcctgctttctatgagtgaatacctgatgtccagcttc
aatgaatcctatgagtcaagatatggggccattgtaatgcaccctcagaaggatgatggt
agtataggttacaccgttcttcacaatagcacgtgtcagcatgctgctccaacctttatc
aatttaatgaatgcagcaattcttaggctggctacacttgataaaaacatgaccatacaa
acacgtaatcatccactgccaatgacagaaagccagcgtctgcaacgtcaagacctggat
gcattttctgcggctattattgtgagtatcgccttctctttcattcctgcttcatttgct
gttcctattgtgaaggaacgtgaaataaaagcaaagcatcagcaattgatcagtggggta
tctatattatcttattggatatcaacatatatttgggatttcataagtttcttagtccct
tcctcttttgctatggttctcttttacatctttggcttagaacagttcattggaagtggt
tctctattgcctacagtcctcattctgttggaatatggtgctgcaattgcatcttcaaca
tactgtctaaccttcttcttttcggaacacagcatggcacagaatgtggtactcttggct
cactttttcacggggatcattcttatggtaatgtcattcattatgggattgatacccgca
actcaagacttgaattcctttctcaagaatttcttcagattatctccatccttttgcttt
gctgatggactagcttcattagctctgctacgccaaggaatgaaagttggatcaaataac
ggatattttgggtggaatgtatctggtggatctatttgttatcttgctgcggagggcatc
atttattttctcttgacacttgggctcgagattttccccccacacaaattaagttttttt
gctataaaagacttcctaagaagtttcagaagaactagtccaactttttctgatgcctat
tctgaaccccttttgagatcttcaacagaaagtgctgctattgatcttgatgaagatata
gatgtccgaactgaaagaagtagggttctttcaggttccatcgataaagccatcatctac
ctacgtaatcttaggaaggtcttccctggagggaggaaccatggtaagaaagtggctgtc
cattcacttactttctcagtgcaagaaggtgaatgttttggctttttgggaacaaatgga
gctgggaagaccactactctatctatgctatcaggagaagtatgtccgagtgctggaact
gcattcatttttggtcaagatatgcgactaaaccccaaagctgctagccagcttattggg
tattgtccacagtttgatgcgctgctagaatttttgactgtccaagaacatcttgagctt
tatgcgagaataaaaggtgtcccagattacctgctagataatgtcgtaatggataagtta
ttagagtttgacttgttaaggcatgcctctaaacaatcgtttactttaagtgggggtaac
aaacgcaagttatctgttgcaattgcaatgattggagatcctcctattgtattcttggat
gagccctctacaggaatggatccgattgcaaaacgttttatgtgggaagttatatctcgt
ttatcaactagaagtggaaagacagctgttattctaactactcatagcatgaatgaagct
caagcactttgcacaagaattggaataatggttggggggaagctaagatgtatcggcagt
ccacagcatctaaaaacacgatttgggaatcatcttgaattagaggttaaacctactgac
gttagctctgttgacttggaaaatttttgtcaaatgattcaagaaaggctatttgacttt
ccttctcatccaaggagtatatttggtgaccttgaagtttgtattcggggggatgattcc
ataacatctgaagatgccttagccacagagattagtttgtcaagagatatgataattttg
attggacgctggcttggcaatgaggaaagtataaggacccttacaaataaccatgggtct
ggtggttcttctaacgagcaattaactgagcagttggcccgtgatggtggtttgccgcta
ccaatattctcagaatggtggttagcaaaagagaaattctcaatgatagattcatttgtt
gtagcttcatttcctggagcaacttctcaaggttgcaatggattaagtgttaaatatcag
ttgccacgtggtgaagatttctcacttgctgatgtttttggactcatagagcaaaacaga
aatcgactagggattgcagaatatagcataagccaatcaacacttgaaaccattttcagc
cattttgctgccaatccatga
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integrated database retrieval system
