Erigeron canadensis (horseweed): 122606679
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Entry
122606679 CDS
T07610
Name
(RefSeq) long chain acyl-CoA synthetase 1-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00061
Fatty acid biosynthesis
ecad00071
Fatty acid degradation
ecad01100
Metabolic pathways
ecad01212
Fatty acid metabolism
ecad04146
Peroxisome
Module
ecad_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
122606679
00071 Fatty acid degradation
122606679
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
122606679
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ecad01004
]
122606679
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecad04147
]
122606679
Enzymes [BR:
ecad01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
122606679
Lipid biosynthesis proteins [BR:
ecad01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
122606679
Exosome [BR:
ecad04147
]
Exosomal proteins
Exosomal proteins of breast milk
122606679
Exosomal proteins of breast cancer cells
122606679
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
SMP_LBD
Motif
Other DBs
NCBI-GeneID:
122606679
NCBI-ProteinID:
XP_043635458
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All DBs
Position
7:36578031..36584209
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AA seq
661 aa
AA seq
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MDKKFAVIVEEGKKGVNGEPSIGPVYRNLLSKDGFPPLDTNLESTWEVFKNSVEKYPNNK
MLGWREFVDGKWGPYKWKTYKTVYDEVLHTASATRTSGIEPGCKVGIYGANCPQWIVAIE
ACNAQSYIAVPLYDTLGAGAINFILDHAEVDVVFVQDKKVKELLNAECTHTQRLKLIVCF
TTMEKEEKDKAESMGIKTYDWSEFLHMGSKNPTELQTPKSSDICTIMYTSGTSGNPKGVI
LTHENAITNIRGVDLFMEQFEDKMTVDDVYISFLPLAHILDLMIEEYFFRNGASVGFFHG
NINELRDDLVELKPTFLAGVPRVLERIHEGVLKGLEEVNPRRRKIFSILYNHKLKYMKAG
YKQKNASPLADLLAFRKVKNRLGGRIRLIVSGGAPLSSEVEEFLRVTSCAFVCQGYGMTE
TCGLATLGYPDEMCMLGTVGSTFVYTDLRLEEVSDMGYDPLSDPPRGEICLRGKAPFAGY
YKNPELTNEVLIDGWFHTGDIGEMQPNGVLKIIDRKKHLIKLSQGEYIALEYLEKVYSIT
PIVEDIWVYGDGFKSSLVAVAVPNKENAEKWAHQNKHKVSYAELCKLTQFKDYILSELKS
TAERNKLRGFEQIKAIIVEPQTFEEQKDLLTATMKKRRAKLLNHYKAGIDDLYKSLTLNK
R
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaagtttgcagtgatagtagaagaaggaaaaaaaggagtaaatggtgaacca
tcaatcggtccggtttatcgtaatcttctatcaaaagatgggtttcctcctcttgacact
aacttagaatctacttgggaggttttcaaaaattcagttgaaaagtatcctaacaacaaa
atgttgggatggcgtgagtttgtagatggcaaatgggggccatataaatggaaaacatac
aaaacagtatatgatgaggtattgcacactgcttccgcgaccaggacttccggaattgag
cctgggtgtaaagtgggaatctatggagcaaactgtcctcaatggattgtggctattgag
gcttgcaatgctcaaagttacattgccgtgcctctgtacgatacacttggggcaggagca
atcaactttatattggaccatgctgaagttgatgttgtttttgtccaagataaaaaagtt
aaagaactattgaatgcagagtgtacgcatactcaacgattaaagttgattgtttgtttc
actacaatggaaaaggaggaaaaggacaaggcagaatcaatggggattaaaacgtatgat
tggagcgagttccttcatatggggagtaaaaatccaacagagctgcaaacacctaaatca
tctgatatatgtacaatcatgtacactagtggcactagtggaaatcctaaaggtgttata
ttgactcatgagaatgcaataacaaatattcgtggagttgatcttttcatggagcaattc
gaggacaagatgaccgtggatgatgtttatatatctttcttgcctcttgctcacattctt
gatcttatgattgaagaatacttttttcgtaatggtgcttcagtcggattctttcatggg
aatattaatgaactgagggatgatttggtagagctaaagccgacatttttggctggagta
cctcgagttttggagagaattcacgaaggtgtgcttaaagggctagaagaagttaacccg
aggaggaggaaaatattcagcattctatacaatcacaaacttaaatatatgaaagcaggt
tataagcagaaaaatgcatcaccacttgcagatttgcttgcttttagaaaggttaagaac
aggctaggtggtcgtattcgtcttatagtgtctggaggagctccgttaagcagtgaggtt
gaagagttcttaagggtaacatcctgtgcttttgtatgtcaaggatatgggatgacagaa
acatgtggtttggctactctaggatatccagatgaaatgtgcatgcttggaaccgtcggt
tcaacttttgtatatacagatttacgtctagaggaagtttcagatatgggttatgatcca
ttatctgaccctccacgaggtgaaatttgtcttaggggaaaagctcctttcgctggctac
tacaagaatccagagctcactaatgaggtcctgatagacggatggtttcatacaggtgac
ataggagagatgcaaccaaacggtgtcctgaaaataatcgacagaaagaaacatctgata
aaactatctcaaggggagtatatcgcacttgaatatttggagaaagtttatagcatcact
cccattgttgaagatatttgggtttatggagatggcttcaagtcatcattggttgcagta
gcagtaccaaacaaagagaacgctgaaaaatgggcccatcagaacaaacataaagtttct
tacgctgagctgtgtaagcttacacagttcaaggactatatcctatctgagcttaaatct
actgcagagaggaacaagctaagaggttttgagcagataaaggctataattgttgagccg
caaacatttgaagagcaaaaggatttgttgactgcaactatgaagaaacgaagagctaaa
ctgctcaaccattacaaggcaggaattgacgatctttataagagcttgaccctgaacaaa
cgctga
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