Erigeron canadensis (horseweed): 122606721
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Entry
122606721 CDS
T07610
Name
(RefSeq) histone acetyltransferase GCN5
KO
K06062
histone acetyltransferase [EC:
2.3.1.48
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
122606721
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecad03021
]
122606721
03036 Chromosome and associated proteins [BR:
ecad03036
]
122606721
Enzymes [BR:
ecad01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
122606721
Transcription machinery [BR:
ecad03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
122606721
Chromosome and associated proteins [BR:
ecad03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
122606721
HAT complexes
PCAF complex
122606721
STAGA complex
122606721
TFTC complex
122606721
SAGA complex
122606721
SLIK complex
122606721
ADA-HAT complex
122606721
HAT-A2 complex
122606721
ATAC complex
122606721
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
FR47
Motif
Other DBs
NCBI-GeneID:
122606721
NCBI-ProteinID:
XP_043635514
LinkDB
All DBs
Position
7:complement(34501004..34507463)
Genome browser
AA seq
535 aa
AA seq
DB search
MDTHSSHLTAPLRSRSSQSPSPSHSASASATSSIHKRKLTAATEDHAPPFSDTVTSESIS
ARGGGGDSEDSEEEFADDDEEDEFDDSSIRNFTASRLENNVGRNVKPKTESVVKVEPVEV
GKDGGGSGAGGAGGAGAVSTPVATPGSVGKEETVKSIFTENLQTSGAYCGREESLKREEE
AGKLKFVCVSNDKVDDHMIWLIGLKNIFARQLPNMPKEYIVRLVMDRGHKSVMVIRRNTV
MGGITYRPYVSQKFGEIAFCAITSDEQVKGYGTRLMNHLKRHARDVDGLTHFLTYADNNA
VGYFNKQGFTKDIFLERERWHGYIKDYDGGILMECKIDPKLPYTDLSTMIHRQRQAIDEK
IRELSNCHIVYPGIDFQKKESGIPKRVCKLEEIPGLREAGWSPDQWGHSLIKFVNASPDG
TPKPKLTGFMRSILKAMHDHADAWPFKEPVDVRDVPDYYDIIRDPMDLKTMSKRVDSEQY
YVTLEMFVADAKRMFANARTYNSPETIYFKCSTRLESFFSGRVKQALESFPTVQQ
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggatacacattcatcgcacttaacagcaccgctccgatcacggagttcacaatcacca
tcaccgtcacactccgcctccgcttccgccacgtcatcaatccacaaacgcaagctcacc
gccgcgacggaagaccacgcgccgccgttctccgacacggtgacttccgagagcatcagc
gctcgtggcggcggaggtgactcggaggattcggaggaggagtttgctgatgacgatgag
gaggatgagtttgatgattcgtcgattcggaattttacggcgtctcgtttggagaataac
gttgggcggaacgtgaagccgaaaacagagagtgtggtgaaagttgagccagttgaggtt
gggaaggatggcggtgggagcggtgcgggtggagcgggtggagcgggtgcggtttcgact
ccggttgcgacgcctgggagtgttggaaaggaggagacggttaagagtatatttacggag
aatttacagacgagtggagcatattgtgggagagaagagagtttaaaaagagaggaagaa
gctggaaaacttaagtttgtatgcgtatcaaatgataaagttgacgatcatatgatttgg
ttaattggactgaaaaatatatttgcaaggcaactacctaacatgccaaaggaatacatt
gttcgccttgttatggacagaggccacaaatctgtaatggtcatcaggcgcaatactgtt
atgggtggcattacataccggccttatgtcagccaaaagtttggagagatagctttctgt
gcaatcacatcagatgagcaagtaaagggatatggcacgagactgatgaatcatttgaag
cgacatgcacgggatgtggatgggcttactcattttctgacatatgcagacaacaatgcc
gttggttattttaataaacagggctttacgaaagatattttcttggagagagaacggtgg
catgggtacattaaagattatgatggagggatccttatggagtgtaaaattgatccaaag
cttccatacactgatttatcaaccatgattcaccgtcagaggcaggcaatcgatgagaaa
ataagagagctctcaaactgtcacattgtctatcctggtattgatttccaaaagaaagaa
tctggaattccgaaaagggtatgtaagcttgaagagattcctggtttgagggaagctggg
tggagtcctgatcaatggggacattctctaattaaatttgtaaatgcatctcctgatggt
accccaaagccaaagttgacaggcttcatgcggtcaattttaaaggcaatgcatgaccat
gctgatgcctggccttttaaggaacctgtagatgttcgtgacgttccagactattatgac
atcattagagatcccatggatcttaagaccatgtcaaaacgggtggattcagaacaatat
tatgtaacacttgagatgttcgttgctgatgcgaaaaggatgtttgccaatgctcgaacc
tataattctccagaaactatttattttaaatgttccaccaggctggaatcattcttctca
ggtagagttaagcaggctctggaatcgtttccaacagttcagcaataa
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