Erigeron canadensis (horseweed): 122606728
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Entry
122606728 CDS
T07610
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 2
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ecad01009
]
122606728
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecad03021
]
122606728
Enzymes [BR:
ecad01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
122606728
Protein phosphatases and associated proteins [BR:
ecad01009
]
HAD phosphatases
Fcp/Scp phosphatases
122606728
Transcription machinery [BR:
ecad03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
122606728
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
dsrm
DSRM_2
LPP20
Motif
Other DBs
NCBI-GeneID:
122606728
NCBI-ProteinID:
XP_043635522
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All DBs
Position
7:complement(38732737..38741153)
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AA seq
767 aa
AA seq
DB search
MSRLGFNNNNNNNKCVVYHGEVCLGELDVIPILDDKQKFLFPNNQIRIHHFTQVSERCSP
LSVLLTISSFSGIRCKLESTSSPARQQMLIDLHATCFYELKTAVVVIGDEEVHLVAMPSK
LKKFPCFWCCVVPAQLYNACLGMLNMRCLSIVFDLDETLIVANTMKSFDDRIEVLTSWIG
QESDPVRVSGMTSELKRYVEDRGLLKQYAENDAVVDNGQTYKVKMEEVPVNAAGNENVLR
PVIRFPEKNLVLTRINPEIRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYA
LEMWRLLDPGSHLIGSKQLLNRVNCVKPGARKSLLSVFQDRNCHPRMAMVIDDRLKVWEE
KDQPRVHVVPAFTPYYAPQAETANAVPVLCVARNVACNVRGGFFKDFDEILLRRLAEHFY
EDEVSNLPSVPDVCNYLVSEDASFVPNGNTNAPMTEGITGPEVAPRLSQQDNRSVDPKSE
RSLPSVLTASIYGPSSFRSVVPLEKPSILGPIQGPEMSNKQRAGYNPPSHGTASSFSSGS
QPPVSEARGDEAFHGFGLQKKNLPQAGQLSDQGVQHNQSSLSNKRGPIDGGNANLPQPSL
SIGVLQEIGQRCGSKVEYRSILSSSRDWQFSYEVMFTGEKIGIGMGKTRKDAQQQAAENA
LRSLADKYAAYIISRSETINKELDNQSSDMENGFLWDSDSDESLVKDVDNSSEVPEMRRS
NLTGQQKRGESARLPEFTSKRSKEEPLQNSLDSSSSWQQPKKRNRVV
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgattagggtttaataataataataacaataataaatgtgtggtttatcatggg
gaagtatgtttaggtgaattggatgtaattccaattttggatgataaacagaaattcttg
tttccaaacaaccaaattagaattcaccattttactcaagtgagtgaaagatgttcacct
ctttcagttctgctaacgatttcgtcgttttcggggattcgttgtaagctggaatcgacg
tcttcccctgctcgacaacaaatgcttattgatctccacgccacgtgtttctatgagtta
aagacggctgtggtggtgattggagatgaagaggtacatttggtggcaatgccaagcaaa
ttaaagaaatttccgtgtttttggtgttgtgtggtaccggcacagttatacaatgcttgt
ctagggatgttgaatatgaggtgtttatctattgtgtttgatcttgacgagacgcttatt
gttgcgaatacaatgaagtcttttgatgatagaattgaggtgttgactagttggatcggg
caagagtctgatcctgttagggtttccgggatgacttctgagcttaaacgatatgttgag
gatcgaggtttgttgaaacagtatgcagaaaatgatgctgttgtagataatgggcagaca
tataaagtgaaaatggaggaagttcctgtcaatgctgctggtaatgagaatgttcttcga
ccggttataagatttccagagaaaaatttagtcttaacccgtattaatccagagattcgt
gataccagtgtgcttgtgaggttacgacctgcgtgggaggatttaagaagctatctaata
gcgaaaggacgcaaaagatttgaagtgtatgtttgcacgatggctgaaagagattatgca
ttggagatgtggaggttacttgacccggggtcacacctaattggatcgaagcaattgttg
aatcgtgttaattgtgtcaaaccaggtgcacgtaagtctttgcttagtgtcttccaagat
cggaactgccatccaaggatggccatggtaattgatgataggttaaaggtttgggaagaa
aaggaccagcctagagttcatgttgtacccgctttcactccttattatgctcctcaggct
gagactgcaaatgcggttccagttctctgtgtggctaggaatgttgcatgcaatgttaga
ggtggtttctttaaggatttcgacgagatactgctgaggcggcttgctgaacacttttat
gaagacgaagtttcaaacctaccatctgtaccagatgtttgcaactatcttgtttcagag
gatgccagttttgtaccaaatggcaacacaaatgccccaatgactgaaggaatcactggt
cctgaagttgcacccagactgagtcagcaggataacagaagtgtggatccaaaatctgaa
agatccctgccatcagtcctaactgcaagtatctatggtccatcgtctttcagatctgtg
gttcctttagagaaacctagcatacttggcccaatccaaggacctgagatgtcgaacaaa
cagcgagctggttataatccgccgtctcatggtacagctagttctttctcttcaggttct
caaccacctgtatctgaggcaaggggtgatgaggcatttcatggatttggattgcaaaag
aagaatctgcctcaagctggtcagctttcagaccaaggtgtacaacacaatcagtcatcc
ttaagtaacaaaagagggcccattgacggtgggaatgcgaatcttccacaaccatcttta
tccattggagtgctgcaggaaattggacaaagatgcggttctaaggttgaatacagatca
attttgagctccagcagggattggcagttctcttatgaggtgatgtttacaggcgagaaa
attggtattgggatgggtaagacaagaaaggatgcgcagcaacaggctgctgagaacgcc
cttcgcagcttggctgataaatatgcagcatatataatttcccggtctgaaacaataaac
aaagagcttgataaccaatctagtgacatggaaaatggttttttatgggattctgattct
gacgaatcacttgttaaagatgtcgacaactcatctgaggttcctgaaatgaggcgttct
aatttgacaggccagcagaaaagaggcgaatctgcaaggttgccagaatttacaagtaaa
aggtctaaagaagaaccacttcaaaattctttagattcatcatcctcatggcagcaacca
aagaaacgtaacagagttgtatga
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