KEGG   Erigeron canadensis (horseweed): 122606734
Entry
122606734         CDS       T07610                                 
Name
(RefSeq) PH-interacting protein-like isoform X1
  KO
K11797  PH-interacting protein
Organism
ecad  Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ecad04121]
    122606734
Ubiquitin system [BR:ecad04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     122606734
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_EML WDR55 Beta-prop_SCAP Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_EIPR1 Beta-prop_DCAF12 Bromodomain Beta-prop_HPS5 WD40_MABP1-WDR62_1st WD_LRWD1 Auxin_resp Beta-prop_SPT8 VPS8_N WDR90_beta-prop_4th
Other DBs
NCBI-GeneID: 122606734
NCBI-ProteinID: XP_043635527
LinkDB
Position
7:36741096..36751948
AA seq 1436 aa
MESGHHTSFDKASSAATQHLGFIDRLSTKSHNQPESEPGHDVAADIDVDLREIYFLVMHF
LSASPCEKTFTQFCNELMEYQLLPKRYHAWYSRYGTASEEETGDGVSFPLSYESVTQRYS
HIEKDHLVKLLKQLILHVAPSRGIFGRTPPTAADVPTLLGIGPFSLLGSTQNETVPPVKA
LPAYLRWPHMQADQVHGIGLREIGGGFPKHHRAPSIRFACYAIAKPSTMVQKMQNIKKLR
GHRDAVYCAIFDRSGRYVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVNINNSVV
ASASNDYNIRVWHLPNGKPLSVLRGHTAAVTAIAFSPRHPFQLLSSSDDGTCRIWEARSS
QCREHVYVPRQTQDVAGSNNGPSSGANPQSNQILCCAYNANGSIFVTGSSDTFARVWVAC
KPNTDASQQPIHEFDVLAGHENDVNYVQFRLVCTHIVNMSRIIYSRGSFCSGCAVASRSS
TSDTVTDEKVPKFKTSWFSHDYIVTCSRDGSAIIWIPKRKSHGRSGRWTRAYHLKVPPPP
MPPQPRRGGPRQRFLPTPRGVNMIVWSLDDRFVLAAIMDCRICVWNASDGRLVHSLTGHS
ESTYVLDVHPFNPRIAMSSGYDGKTIIWDIWEGVPIRIYEIGRFKLVDGKFSPDGTSVVL
SDDVGQIYLLNTGQGESQKDSMYDQFFLGDYRPLARDAHGNAIDQETQLQPYQRNMQDAL
CDSSMLPYPEPYQSNYQRRRLGALNMEWRPPSRNFAIGTDIGLGQEYQMLPLADLDVVAE
PLPEFLDAMFWEPENDVIIDSTDSEYNVTDDDSSGDEQASLGKSSVDAAESSGGNNIDDR
SRRWLKRKKLKDLEWESSSGRRVKTRNSDDHEGTSSRCKGSKKSKNNRNSKATPSRPQRT
AARNGKKLSSQDFGSEKDDDDLSEDDSSESEPCVEEEDKPTVLIGVSSTVNAAPPPESRH
KLVLKLPITKKSPVFETIPIQCHDPSTSLRHKEENSKHVSGDHETTANMEENGRTEDRKP
TKIIFKSKTGLNSDAKSLGECSQTNNEADDTVSQKKNLIKLKLSNPKAKNNDNLTEVDSS
EDAIPRIKPLRIKLGFRESDDAPQNHNNEAHMIPYDSSMNGASGSKINGQCSKTNWLLLA
DQDEGCRYIPQLGDEVAYLRQGHQEYSELQALTEHVPWIQFGEKIRDVEICSVDAVNYVQ
LVGSGESGCKIKLRFIDPSSKVKDKTFQLTLPELVNFPDFLVERTCYEASLERNWHPGDR
CSVWWRDQGGGGQLWEGVVVSISDKSPDFPGSPWEKFSVTYSGDEVELTRHSPWELLDKD
IRGEQPGIDPNIRKMMISLLSKLEQSTRGNQDKYGIMKLKRASEKPEFINRFPVPLTLDI
IDQRVKKFYYRSFEALKHDITVMLSNGQAFFLNHANMSAKLQHLSEWFDRKLSTLR
NT seq 4311 nt   +upstreamnt  +downstreamnt
atggagtcgggacatcatacatcttttgataaagcttcctccgcagctacgcaacatttg
ggctttatagatagactgtctacaaagtctcataatcaacccgaaagtgaaccgggtcat
gatgttgcagcagatatagatgtagacttgagagaaatatactttttagtgatgcatttt
ctatctgccagcccatgtgaaaagacttttacacaattctgtaatgaacttatggaatat
cagcttttaccaaagagataccatgcatggtactcaaggtacggtacagcttcagaagag
gaaactggtgatggtgtttctttccctttaagctatgaaagcgttacacaaaggtattct
catattgaaaaggaccacttggtaaaattgctgaaacaattaatactgcacgtggctccg
tcaaggggtatatttggaagaacacctcctactgctgctgatgttcctactcttcttgga
attggcccgttttcactccttggatcgacccaaaatgaaacggtgccacctgttaaggct
ctgccagcatatcttcgttggcctcacatgcaggctgatcaggttcacgggattgggttg
agggaaattggaggtggttttccaaaacaccatcgcgcgccatccattcggtttgcatgt
tatgctatagctaaaccgtcaaccatggtgcaaaagatgcaaaatataaagaagttaaga
ggacaccgagatgccgtttactgtgcaatattcgatcggagtgggagatatgtgattact
ggatcagatgatcgtttggtgaaaatttggtcgatggaaactgcgttttgccttgccagt
tgtagaggacatgagggtgacattaccgacttagctgtaaatataaataatagcgtagtg
gcatctgcatcaaatgattataatattcgtgtttggcatttgcccaacggaaagcctctt
tcagttttgagaggacataccgctgccgttactgccattgcatttagtccaagacaccca
ttccagcttttatcgtcatctgatgatgggacttgtaggatctgggaagctaggtcttcc
cagtgtcgtgaacacgtttatgttccgaggcagacccaagatgttgctgggagtaacaat
ggtccttcatcaggtgctaatcctcaaagcaatcaaatactatgctgtgcttataatgct
aatggatcaatttttgttactggtagctctgatacatttgctagggtttgggttgcttgt
aaaccaaatacagacgcttcacagcaaccaatacatgaatttgatgtattggcgggtcat
gagaatgatgtgaattacgtacaattcaggttagtttgtacccatattgtcaatatgtct
cggataatatattcacgtggttcgttctgcagtggttgtgccgtggcttcaaggtcttca
acttcagataccgtgacagatgagaaagtaccaaaatttaaaacttcatggtttagccat
gattacattgttacgtgttcccgtgatggcagtgcaattatttggattccaaaacgcaaa
tctcacggaagaagtggacggtggacacgggcatatcatctcaaagtccctccaccacca
atgccacctcagccacgccgtggaggtccacggcagagatttcttccaaccccgcgtggg
gtcaatatgattgtatggagtcttgatgatcgttttgtgcttgctgccatcatggattgc
aggatatgtgtttggaatgctagtgatggtcgcttggtacattccttgactggccatagt
gaatctacctatgttttggatgttcatccttttaatccccgtattgcaatgagttctggg
tacgacgggaagacgataatttgggatatttgggaaggcgtaccaatccgcatatatgaa
attggacgttttaaattggttgatggaaaattttcaccggatgggacatctgttgtactc
tcagatgatgttgggcaaatctacttgctgaatacagggcagggtgagtcccaaaaggat
tcaatgtatgaccagtttttccttggtgattaccggcctcttgcaagggacgctcatgga
aatgccattgatcaggagactcaacttcagccctaccaaaggaatatgcaagatgctctt
tgcgactcaagcatgcttccatatcctgaaccatatcagagtaattaccagagacgtcgg
ttgggtgcattgaatatggagtggcgacctccatctcgaaattttgctattggcacagat
attgggttgggtcaagaatatcaaatgttacctttggctgacttagatgtagttgctgag
ccgctaccagagttcctagatgccatgttctgggagccagaaaatgatgtcatcattgac
agtactgattcagagtacaatgttactgatgatgattctagtggagatgagcaagcaagt
ttaggtaaaagctctgttgatgcagcagaaagcagtggtggaaataatattgatgacagg
agccggagatggttaaaaagaaagaaactgaaggacttagaatgggagtcttcgtctgga
cggcgtgttaaaacaaggaactctgacgatcatgaagggacatcatccagatgtaaagga
tcgaagaaatcaaaaaacaaccgtaactcgaaggctacaccatctagacctcagcgtact
gctgcaaggaatggtaaaaagttatcatcacaagattttggaagtgagaaggatgacgat
gacttgtcagaagatgattcgtcagaaagtgagccgtgtgttgaagaggaggacaaacca
acagttctgattggagtctcgtcaactgtgaatgcagcaccaccacctgaatcgagacat
aaattagtattgaagctcccaatcacaaaaaaatcaccagtttttgaaactatccctatt
caatgtcatgacccttcaacatctttgagacacaaagaagaaaactcgaaacatgttagt
ggggaccatgagacaacggcaaatatggaagagaatggtagaacagaagatcgcaagcct
accaaaatcatatttaaatcaaagacggggctcaattctgatgcaaaatcgttgggagag
tgctctcaaacaaacaacgaggcagatgatactgtatctcaaaagaaaaaccttatcaag
ttaaagttgagtaatccgaaggcgaaaaataatgataatttgaccgaagttgattcatct
gaggatgcaattcctagaataaaaccattgagaatcaaacttggttttcgtgaatcagat
gatgcacctcaaaatcacaataatgaagcgcatatgatcccgtacgatagttctatgaat
ggtgcttccggaagcaagataaatggtcaatgtagcaaaaccaattggcttttgttggca
gatcaagatgaggggtgtcgttacatccctcagttaggtgatgaggtagcatacctaaga
cagggtcatcaagagtactcagaattacaagccttgactgaacatgtgccatggattcaa
tttggggaaaagataagagacgtggaaatttgttctgtagatgccgtaaattatgttcaa
cttgtaggttcaggggagagtggttgtaaaattaagcttagatttattgatccttcttct
aaagtgaaagataagacatttcagttaacgttaccagagttggttaactttcctgatttc
ttagttgagagaacatgttatgaagcttcactcgaaagaaactggcatccaggagataga
tgctcggtatggtggcgagatcaagggggcggtgggcagttgtgggagggtgtggttgtt
tcaatcagtgataaatcacctgactttccgggtagcccatgggagaaattttccgttacg
tattcaggtgatgaggttgagctgactcgtcacagtccttgggaattacttgataaagat
atccggggggagcagcctgggattgatcccaatattagaaagatgatgatttctttgctt
tctaagctagagcagtcaactaggggcaatcaggataaatatggcatcatgaagttaaaa
cgggcttccgagaagccagaattcataaataggtttccagttccattgactcttgatatc
attgatcaaagggtaaagaagttctattacagaagttttgaagcgctgaagcatgatatc
acagtgatgctatcaaacggtcaagccttttttcttaatcatgcaaacatgtcagcaaaa
ctgcagcatctttcagagtggtttgatagaaaattgtcgacgttaagatga

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