Erigeron canadensis (horseweed): 122606764
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Entry
122606764 CDS
T07610
Name
(RefSeq) probable methionine--tRNA ligase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00450
Selenocompound metabolism
ecad00970
Aminoacyl-tRNA biosynthesis
ecad01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
122606764
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122606764
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ecad01007
]
122606764
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecad03016
]
122606764
Enzymes [BR:
ecad01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
122606764
Amino acid related enzymes [BR:
ecad01007
]
Aminoacyl-tRNA synthetase
Class I (U)
122606764
Transfer RNA biogenesis [BR:
ecad03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
122606764
Prokaryotic type
Other AARSs
122606764
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
Anticodon_3
tRNA-synt_1
tRNA-synt_1e
CoV_peptidase
Motif
Other DBs
NCBI-GeneID:
122606764
NCBI-ProteinID:
XP_043635554
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All DBs
Position
7:27291954..27299102
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AA seq
816 aa
AA seq
DB search
MGDVTTGAGDGQKPIKLPVPGKRNILITSALPYVNNVPHLGNIIGCVLSADVYARYCRLR
GYNAIYICGTDEYGTATETKALEENCSPKEICDKYHAIHRDVYKWFNISFDHFGRTSTPQ
QTEVCQAIFNKLLENNWLSENTMQQLYCDTCSKFLADRLVEGSCPTPGCNYDSARGDQCE
KCGKLLNPTELINPRCKVCSTSPRIRDTDHMFLELPLLEGKLREYISTMSVAGSWSANAI
HATNAWLKEGLRQRCITRDLKWGVPVPLEKYKEKVFYVWFDAPIGYVSITKCYTPEWEAW
WKNPENVELYQFMGKDNVPFHTVMFPSTLIGTAESWTMMKTISVTEYLNYEAGKFSKSKG
VGVFGNDAKDTGIPVEVWRYYLLTNRPEVSDTLFTWADLQAKLNSELLNNLGNFINRVLS
FIAKDPESGAGKGSGYSYLVPDAPGAESHALTKALGDKIGNYVDQYVDAMEKVKLKQGLK
IAMSISGEGNAYLQESQFWKLYKEDFPSCSIVMRTSVGVVYLLACLLEPFMPSFSVEVLK
QLNLPSELSLSDDKGDVLKAKCPWEIIPAGHKIGAPVPLFKELKDEEVEFFRNKFAGSQA
DRADRAVKEEAEAKKIAEKLKNTSISEKSGKKERPAKSAAESKKPKSTTEQEITISRLDI
RVGVIKEVQKHPDADSLYVEKIDVGEDQPRTVVSGLVKYIPLEEMQNRKVCVLCNLKPAT
MRGIKSHAMVLCANSGDHTKVELVEPPESAAIGERVVFSGFDGAPDDVLNPKKKVWETLQ
VDLHTDKDLIACFKDLPFTTSAGVCKVSTISDGPIH
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgggcgatgttacaaccggcgccggcgacggtcagaaaccaattaaacttccggttcca
ggcaaaagaaacatccttattacgagtgcgttaccttacgtcaacaacgtacctcatctc
ggaaacattattggatgtgtgttgagtgcggatgtgtatgctaggtattgtcggttgaga
ggatacaatgcgatatatatatgtggtactgatgagtacggaactgccactgagacaaaa
gcgttggaggaaaattgttctcctaaagaaatttgtgataagtatcatgcgattcataga
gacgtgtataaatggttcaatataagttttgatcactttggacgaacatcaacacctcaa
cagactgaagtttgccaggcaattttcaacaagttattggaaaataattggctttcggag
aatactatgcaacagctttactgtgatacatgtagtaagtttttagctgaccggctagtt
gagggctcctgccctacaccaggctgtaactacgattctgcacgaggagatcaatgtgaa
aagtgtggcaagctgttaaatccaacagaacttattaatcctagatgcaaggtttgttca
accagtcctcgaattcgtgatacagaccacatgtttcttgaacttcctttgttggaaggt
aaactgcgtgaatatattagcacaatgtcagtggctggctcgtggagtgcaaatgccatt
catgcaacaaatgcctggctaaaagaaggattgaggcaacgttgtatcactagagatttg
aagtggggtgttcctgttcctcttgagaaatataaagagaaggttttctatgtatggttt
gatgcaccaattgggtacgtttcgattactaagtgctacacgcctgagtgggaggcttgg
tggaagaatcctgaaaatgtggagctatatcagtttatgggcaaggataatgttccattt
cacactgtaatgtttccttctacacttattgggactgcagagagctggactatgatgaag
actattagtgttacagagtacttaaattatgaggcagggaagttttcaaagagtaagggt
gtgggtgtcttcggaaatgacgccaaggatactggcattcctgtagaagtatggagatat
tatctcttaaccaataggccagaggtatcagacacgttatttacatgggcggatttgcag
gcaaagttaaacagcgaattgctaaataatttaggcaatttcatcaaccgtgtcttaagc
tttattgctaaagacccagagtcgggagctggcaagggttcaggatacagttacctagtt
cctgatgctcctggtgcagagtcacatgccttaacaaaagcattgggagacaagattggt
aactatgttgaccaatatgtggacgccatggagaaggtcaaactaaagcaaggattgaaa
attgcaatgagtatttctggcgagggaaatgcatatctacaagaaagtcaattctggaag
ctttacaaggaggacttcccttcatgttccattgtcatgagaacttctgtgggagtggtt
tatcttcttgcatgccttttagaaccttttatgccatcgttttcggttgaggtactcaag
caacttaacttgccctctgaactatccctttctgatgataaaggggatgttttaaaggcc
aaatgtccttgggagatcattcctgctggtcacaaaattggggcccctgtgcctttattc
aaggaattgaaagatgaagaagtggaattttttaggaataagtttgctggaagtcaagct
gaccgtgcagaccgggctgtgaaggaagaagctgaggcaaagaaaattgctgaaaagttg
aagaacacgagtatttctgaaaagagtggaaagaaagaacgcccagctaaatctgcagct
gaatccaaaaaacctaagtctactactgaacaggaaataactatcagtagacttgatatt
cgtgttggggttattaaggaggttcaaaaacatcctgatgctgattcgttgtatgtggaa
aagattgatgttggtgaagatcagcctagaactgttgttagtgggctcgtcaaatatatt
cctcttgaggagatgcagaaccgaaaagtttgtgttctttgcaatctaaagccagcaacc
atgcgtggtattaaatcacatgcaatggttctttgtgccaacagtggtgatcacaccaag
gtagaattggtggagccacccgagtctgctgctattggagagagagttgtcttttctggg
tttgatggtgcgcctgatgatgttcttaaccctaagaagaaggtttgggagacacttcaa
gtggatttacatacagacaaggatcttatcgcctgctttaaagatctaccgtttaccact
tctgctggtgtttgtaaggtgtctaccatatccgatggacccattcactga
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