Erigeron canadensis (horseweed): 122606788
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Entry
122606788 CDS
T07610
Name
(RefSeq) ubiquitin-like
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03010
Ribosome
ecad04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
122606788
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122606788
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
ecad03011
]
122606788
04121 Ubiquitin system [BR:
ecad04121
]
122606788
Ribosome [BR:
ecad03011
]
Ribosomal proteins
Eukaryotes
Large subunit
122606788
Archaea
122606788
Ubiquitin system [BR:
ecad04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
122606788
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
TBK1_ULD
zf-C4pol
Rad60-SLD_2
Ubiquitin_5
Dsc3_N
Sde2_N_Ubi
DUF2604
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
122606788
NCBI-ProteinID:
XP_043635578
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All DBs
Position
7:complement(28618866..28621039)
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AA seq
139 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSNTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGRRGAAAYKVEPSLIALAQKYIQNKKICRKCYARLHPKATNCRKK
KCGHSNQLRGKNVPYQYGS
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atgcagatattcgtgaaaaccctaacagggaaaaccatcacccttgaggttgaaagcagc
aacactatcgacaatgtgaaggccaaaattcaggacaaagaaggtatcccaccggaccag
caacgtttgatttttgccggaaagcaacttgaagacggtcgtactcttgctgattacaac
atccagaaagaatcgactcttcatttggtgttgaggcttaggggaggacgcaggggtgct
gccgcttataaggttgaaccttctttgattgctttggctcagaagtatatccaaaacaag
aaaatttgccgcaagtgctatgctcgtctccacccaaaggcaaccaactgcaggaagaag
aagtgtggccacagcaaccaattgagagggaagaacgttccataccaatatgggtcgtga
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