Erigeron canadensis (horseweed): 122606831
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Entry
122606831 CDS
T07610
Name
(RefSeq) RGG repeats nuclear RNA binding protein A-like
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ecad03041
]
122606831
Spliceosome [BR:
ecad03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
122606831
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HABP4_PAI-RBP1
Stm1_N
Motif
Other DBs
NCBI-GeneID:
122606831
NCBI-ProteinID:
XP_043635642
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All DBs
Position
1:complement(46318566..46322046)
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AA seq
349 aa
AA seq
DB search
MASRNPFDLLVDDDNDDVTQLIAKLPVAAPAKKAPAAGGLTAKPAPKKAPAVQEFKTERG
GGRAGSRGAGRGGRGGRGFNRDSANNENTNGNTNGFNGGYMPTADGEVDKFSERRGFSSS
RGAYRGGRRGGYANGDMDGERPRRVFERRSMTGRGNDLKRDGAGRGNWGSPTAVPKVLDE
PVAEPEKNEEPEKPAAQEDGVDANKENPAPEAEVKEPEEKEMTLEEYEKVLEEKRKALQT
LRAEERKVGLDKDLEKMQLLSSKKSEEEIFVKLGSEKEKRKDAEKEEKAKKSLSINEFLK
PTEEERNYSGGRGRGRGRGGRAGYGGGNRINDVAPAIEDVKQFPSLGVK
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggcctcaagaaacccatttgatcttttggttgatgatgataacgatgacgtcactcag
ctcattgccaagcttccggttgctgctccggctaagaaagctccggctgccggtggtttg
actgctaagcctgctcctaagaaagctccggctgtgcaagagttcaagactgagaggggt
ggaggtcgcgctggtagtcgtggtgcaggccgtggtggccgtggaggacgcggctttaac
cgtgattccgctaacaatgagaacactaatggaaacaccaatggcttcaatggaggttac
atgcctacagctgacggagaggttgataagttctctgagagacgtggattcagttcttcc
cgtggcgcttatcgtggtggtcgtcgtggtggttatgcaaatggggatatggatggtgaa
cgccctagaagggtttttgaacgccgcagtatgactggtcgtggtaatgatcttaagcgt
gatggtgctggtcgtggtaactggggatctcccactgcagttcctaaggtgctcgatgaa
cctgtggctgagcctgagaagaatgaagagcctgagaagcctgctgcacaagaagatggt
gttgatgccaacaaggaaaaccctgcacctgaggcagaggtgaaagagcctgaggaaaag
gaaatgacacttgaagagtatgagaaggttttagaggagaagagaaaagccttgcaaaca
ctaagagccgaggaaagaaaggttgggttggacaaagatctagaaaaaatgcaattgtta
tccagcaagaagagcgaggaggaaatctttgttaaactgggttctgagaaggagaagcgc
aaagatgctgaaaaggaagaaaaagctaaaaagtcactaagcatcaatgagtttttgaag
cctactgaagaggaaaggaactacagtggtggccgaggtaggggtcgtggccgtggtggt
cgagcaggatatggtggtggaaacagaatcaatgatgtggcacctgccattgaggatgtg
aaacagttcccatcattgggggttaagtga
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