Erigeron canadensis (horseweed): 122606833
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Entry
122606833 CDS
T07610
Name
(RefSeq) peroxisome biogenesis protein 1 isoform X1
KO
K13338
peroxin-1
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
122606833
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122606833
Membrane trafficking [BR:
ecad04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
122606833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-1N
AAA_16
NPHP3_N
AAA_lid_3
AAA_22
AAA_5
NACHT
RuvB_N
IstB_IS21
AAA_14
nSTAND3
Bac_DnaA
AAA_7
ATPase_2
AAA_25
RNA_helicase
Mg_chelatase
AAA_33
AAA_24
AAA_19
NB-ARC
AAA_11
AAA_18
TIP49
ATPase
KAP_NTPase
AAA_3
PhoH
Sigma54_activat
SLFN-g3_helicase
AAA_lid_PRS2_C
Zeta_toxin
Cu
KTI12
Motif
Other DBs
NCBI-GeneID:
122606833
NCBI-ProteinID:
XP_043635640
LinkDB
All DBs
Position
7:17262037..17282024
Genome browser
AA seq
1104 aa
AA seq
DB search
MEMEVRSVAGIQGCYVSLPFHFIQTLLQSTSSSFIALELRSLANPDDFWYVAWSGSSSSS
SSAIQIAQQFAECIRLPDHTIVRVRAIPNLPKAISVMIEPDTEDDWEVLELNAEHAEAAI
LKQVGIVHDGMRFPLWLHGHKTVTFSVLSTDPKEPMVQLVPGTEVSVAPKRRRKTGNSIV
KALLRIQDGDNRFLQKCQVNDTEMGMILTSAAFIHPETAEFFSLDSLQTIVLETRLVQKE
SKLNHENSTLKEVNKGNPFDKDSRQAIVCVLLSDSVARGHVMIAHSLRYYLRASLHSWVH
VKSCNVIVQKDAPSFLLSPCQFKFLGKKLAENGGFDNLNGRKNRERGKMFLKTNSDTQSD
MPDWSTHERIITVLSDESSDHENEETPVSSSTRTGLLHLLRAWILAQQDAIFSFSKTESS
SIILGNKTLVHFQVKDLEFIKHVKKHEVRKSGESSVDIMYVMSVSEDTVKSGVAYEIEFL
ERHKTKVNQKSLDFFLQKSCLGEGLPLYSVKERASENRSNIEISSLSWMGTTAADVTNRL
MVLLSPTSSTFLSTYDLPFPGHVLIYGPPGSGKTLLATTVAKTIEEDDSVLAHIVYVSCS
RLSSDKSQKIHQALSSYLAEALDHAPSLVVLDDLDSIIASHNNSEDLHASSSSTLLLEFL
TGILDEYEEKCKNSCGVGPIALIACVQTLTSIPQALSSSGRFDFHVQLAAPAAAERGALL
KNEIQKRSLLCFDDILVDVASSCDGYDAYDLEILVDRSVHAATGRFVSGGLTFGSDNKPT
LTKDDFLQAMKGFLPIAMRDITKSASEKGHGGWQDVGGLTEIRNSIKEMIELPSKFPMIF
SQAPLRMRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIF
SKAAAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRP
DLLDAALLRPGRLDRLLFCDFPSPQERLDILIVLSRKLPLAKDVNLETTAQVTEGFSGAD
LQALLSDAQLAAVHDHLNSQDAHKPGIMPLITNTLLQSISTSARPSVSEAEKQRLYNIYG
QFLDAKRSAAAQSREAKGKKATLA
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atggagatggaagtaagatcagttgcaggaattcaaggttgttacgtttcattgccattt
cattttattcaaacactcctccaatctacttcttcttcttttatagctcttgaacttcgt
tcacttgctaatcctgatgacttctggtatgtcgcctggtctggctcttcctcttcttcc
tcttccgctattcagattgctcaacaatttgcagaatgtattcgtctgccggatcataca
attgttagagtacgtgccattcctaatcttccaaaagccatcagtgtgatgatagaacct
gataccgaagatgattgggaagttctagagctaaatgcagagcatgcagaggcagctatt
ttaaagcaggtaggaattgtccatgatggaatgagatttcctttgtggttgcatgggcat
aaaactgttacattttctgtactctcaactgatcccaaggaaccaatggtgcaacttgtg
ccggggacagaagtctctgttgctcctaagagacgcagaaaaaccggaaactccattgta
aaggcattactacgtattcaagacggtgacaacagatttcttcagaaatgtcaagtcaat
gacactgagatggggatgatactcacttctgctgcctttattcatccagaaacagctgag
tttttttcattagattctcttcaaactatagttttagagacaaggttggttcaaaaggaa
agcaagttaaatcatgaaaattcaactctaaaagaagttaataagggaaatccatttgac
aaggacagtagacaggctattgtttgtgttctgctttcagattctgtggctagaggacat
gtcatgatagctcactcattacggtattatttgagagcgagcctacattcttgggtacat
gtgaaaagttgcaatgtaatcgtacaaaaagacgccccttcatttcttctttctccctgt
caattcaagtttcttgggaaaaagctcgctgaaaatggcggttttgataatcttaatggc
cgcaagaatcgagagcgagggaaaatgtttttaaagacaaactcggacacccaatctgac
atgcctgattggtcaactcatgagagaataatcacagtcctttcagatgaatcatcagat
catgaaaatgaagaaacccctgtcagctccagtactagaactgggttactacatcttctg
cgtgcatggattctggctcaacaagatgctattttttctttttctaaaacagaatcaagt
tctattattttgggaaacaagacgttggttcactttcaggttaaagatcttgaatttata
aaacatgtgaaaaaacatgaagtaagaaagagtggtgaatcatcagtggatatcatgtac
gttatgtcagtttctgaagacactgtgaaaagtggagtagcttacgagattgaatttttg
gaaagacacaagacaaaagtaaatcagaaaagcttagatttttttctacagaagtcgtgt
ttgggtgaaggtttacctctttattctgttaaagaaagggcatctgaaaatcgatctaat
atagagatatcttcattgagctggatgggcacaacagcagcagatgtaactaatagattg
atggtgttattgtcccctacctctagcacgttcctaagtacttatgatctcccttttcca
ggacatgtgttgatctatggacctcctggttctggtaagacgttattagccacaactgtt
gcaaaaactattgaagaagatgatagtgtcttggcacacatagtttatgtaagctgttct
agactttcctcagataagtcccaaaaaatccatcaagctctttctagttacttagctgaa
gcattggatcatgctccttctcttgtggtacttgacgatcttgatagcataatagcatct
cataataactcagaagaccttcacgcttcatcttcttctacattgttattagaatttctc
acaggcatcttggatgaatatgaggaaaagtgtaagaattcatgtggagttggtcccatt
gcattgatagcttgtgtgcagaccctaactagtattccacaggccttgagctcttctggc
aggtttgacttccatgtgcaactggctgctcctgcagctgctgaacgtggtgctttactg
aaaaatgagattcagaaacgttctttattatgttttgatgacattttggtggatgtagct
tcttcatgtgatggatatgatgcatatgatctggaaattttggttgataggtcagttcat
gctgctactggtcgctttgtctctggtggcttgacttttgggagtgacaataaacctact
ttgacaaaggatgattttctacaagcaatgaaggggtttttgccgatagccatgcgtgat
attactaagtctgcttccgagaagggccatggaggctggcaggatgttggtggtctaact
gaaattcgtaattctatcaaagagatgattgaactgccttcaaagtttccaatgatattt
tcacaagctcctctacggatgaggtctaatgttctcttatatggtcctcctggttgcggt
aaaacacatattgttggtgctgctgctgctgcatgttcactacggtttatctctgtgaaa
ggacccgagctgctgaataaatatatcggtgcttctgagcaagcggtacgtgatatattc
tcaaaagcagcagcagcagccccatgcctcctcttttttgatgaatttgactcaattgct
ccaaaaagaggtcatgacaatactggggtgaccgatcgagttgttaatcaatttttaaca
gagttagatggcgttgaagtgttaactggagtatttgtttttgctgccactagtagacct
gatttactcgatgctgccttgctgcgacctggtagattagatcgtctacttttctgcgat
tttccgtcaccgcaagagagactggatattcttattgttctttccagaaagctaccattg
gctaaagacgtcaatttggaaactacagctcaagtgacagaaggatttagtggagcagat
ctccaagctctcttgtcagatgcacagctggcagccgttcatgatcatctaaacagtcaa
gacgctcacaagcctgggattatgccgctgattactaataccctcttacagtcgatttcc
accagtgcacgaccttcagtttcagaagctgaaaaacagagattatacaacatttatggc
cagttcttggatgctaaaagatctgctgctgcacagtcgcgggaagctaaagggaaaaaa
gcaaccctagcatga
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