Erigeron canadensis (horseweed): 122606841
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Entry
122606841 CDS
T07610
Name
(RefSeq) U-box domain-containing protein 13-like
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
122606841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122606841
Enzymes [BR:
ecad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122606841
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
U-box type E3
122606841
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
zf-RING_UBOX
zf-Nse
HEAT_2
zf-C3HC4_4
Neurochondrin
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
122606841
NCBI-ProteinID:
XP_043635653
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All DBs
Position
7:29046143..29052828
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AA seq
648 aa
AA seq
DB search
MTESGKIGVIIKLIDVVNEISGITDYRNTVRKPFFNLARRLKLLSPLFEEIRDVKDVIND
NDDHDLYQSLLLLLQSFESAKQLLKLGSEASKIYLALEKEEIMKKYQEVTARLEKDLEGI
SLEKLDISDEVKEQAALVIAQFKRAKGRTDAPDIELSEDLSSLYNKGTEVVADPEVLKRL
IEKLQLTGINDLTDESITLHEMVTASDGDPGETIEKMSMLLKRIKDFVQTENPNVDLPPG
ETSAPSNTNDQRTSLKNHKNTVIPDDFRCPISLELMKDPVIVSTGQTYERTCIEKWLEQG
HRTCPKTQQNLTSTALIPNYVLRSLIAQWCETNGIDPPKRASRSSSACTPAERSIINVLL
TKLRSVSPDDQRTAAGEIRLLAKRNADNRVAIAEAGAIPLLTHLLIAPDSRTQEHAVTAL
LNLSICEDNKGSIVSSGAVPGIVQVLRKGSMEARENAAATLFSLSVIDENKVTIGSLGAI
PPLVLLLIEGTQRGKKDAATALFNLCIYQGNKGRAVRAGVITTLMELLTEPQGVMKDEAL
AILAILSSHPEGKVAIGKADAVRVLVDFIGSGSPRNKENAAAVLVHLCSGDHKYLVEAQE
LGVMGVLMDLLHNGTDRGKRKAAQLLEKITRFTEQQKLHHGETESNNS
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgacggaatcaggaaaaatcggagtaataataaaactaattgatgttgttaatgagatt
tccggtataacagattaccggaatacggttaggaaaccgttttttaacctagctagacgg
ttaaagctgttaagtccgttatttgaggagattcgtgatgttaaagatgtgattaatgat
aatgatgatcatgatttgtatcagtccttgcttttgttattgcaaagctttgaatctgct
aaacagctcctcaaattgggtagtgaagctagcaaaatctatctggccctggagaaggaa
gagatcatgaaaaaataccaggaagttacagctcgtttggaaaaagatttagagggcatt
tctttggagaaacttgacatatcagacgaagttaaagaacaggccgctcttgtgattgct
caatttaaaagagccaaaggaagaactgatgcaccagacattgaactgagtgaagatctt
tcatccctttacaacaagggtactgaagtggtagctgatccggaagtcttaaaaagatta
attgagaaattgcaactaaccggaattaatgaccttactgacgaatcgataactttgcat
gaaatggtgactgccagtgatggagatcccggggagactatagaaaagatgtcaatgctg
ctaaaacgaatcaaagattttgtacaaaccgagaatccaaatgtggatttaccacctgga
gaaacttctgctccatcgaatacaaatgatcaaagaacttcattgaaaaaccacaagaat
acagttatacccgatgattttcgctgtcctatatcacttgagttgatgaaggatcccgtt
attgtctcaacggggcagacatacgagcgaacatgtatagagaaatggttggaacaagga
caccggacatgtcccaagacacaacaaaacctaacgagcaccgctctcataccaaactat
gtgctacgcagtctaatagcccaatggtgtgagaccaacggaatagacccaccaaaacga
gcaagtcggtcatcttccgcatgcaccccagcagaaaggtccattataaatgtgctactc
accaagctaaggtcagtcagtcctgatgaccaacgtacagctgctggtgaaatccgtctc
cttgcaaaacgtaacgctgataaccgtgtagccatagccgaagccggtgccattccgctc
ctgacccaccttttaattgcaccagattcccgcactcaagaacacgcagtgaccgctctt
cttaacctttccatatgtgaggataataaaggaagcatagtatcttctggagcagttcct
gggattgttcaagtgctaagaaaaggtagcatggaagcacgggagaacgcggccgccacc
ctttttagcctttcagtaatcgatgaaaataaggtgactattggctctctaggagcaatc
ccgcctcttgtactgcttttaattgaaggcacccaaagaggaaagaaagatgctgctact
gccttatttaacttgtgtatatatcaaggcaataaaggccgcgcagtgagggcgggtgta
attactacattaatggagcttctgaccgagccacaaggtgtgatgaaagatgaagcttta
gccatcttagccatcctctcaagccatcctgaaggaaaagtagctataggtaaagcagac
gcagtacgggttttggttgatttcattgggtctggttctccaaggaacaaagaaaatgca
gctgcagttttagtgcatctttgttcaggagatcacaagtatctagtggaagctcaggag
ctgggagtgatgggggtactaatggatttgctacataatggtacagatagggggaaaaga
aaggcggcacagttgctggaaaagataacgagatttacagagcaacaaaagttacatcat
ggtgaaaccgaatcaaacaactcatag
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