Erigeron canadensis (horseweed): 122606876
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Entry
122606876 CDS
T07610
Name
(RefSeq) golgin candidate 5-like
KO
K20286
TATA element modulatory factor
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122606876
Membrane trafficking [BR:
ecad04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
122606876
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
DUF7491
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
122606876
NCBI-ProteinID:
XP_043635693
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All DBs
Position
7:597973..612187
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AA seq
1010 aa
AA seq
DB search
MAWFSSKVSLGNFPDLAGAVNKFSESVKNIEKNFDSALGLEDKAGGTTTSTTEASGSWSS
DLMSFMGQKAEDGIVESKEKHEPSSPEPSSLSKEKEGVQYDSSPESVVEHRESVKEENVE
TLKPEEHKEHHVETNIEALEQGNDSTEIPAGTMNVELENSDVAGKPLETNVAITEDAENV
AGKYAVTDIVISEQKITPVANNSEAVAEAEIDSQDQLSLGHNDQSEFLDLNSEGGSLKKS
ESIQDEPTDFPDQVIGTFELNEVHHVPDLQKDENALKIESEETSHEISAAEVVKPSYDGQ
DIKVTVLNGVQSVTLDVANAAEEGQLHLSESSRGISMMVPEVGSKEENANAEAHIPGQLI
SENQSDINEELANSENNLSHSADSARELEKVTREMKMMETALLGAARQAQAKADEIAKLM
NENEQLKSVIEDQMRKPNEADIESLREEYHQRVSSLERKVYALTKERDTLRREQNKKSDA
AALLKEKDEIITQIMAEGEGLSKKQAAQESQIRKLRAQIREFEEEKKGLMAKLQVEESKV
ESIRRDKAATEKLLQLTIEKNQAELTTQKEYYTNALAAAKEAEALAEARANSEAKTEVES
RLKEAEEREVMLVQTLEELRETLSRTEQQAVFREDMLKRDVEDLQKRYQESERRCEVLVM
EIPDSTRPLLRQIEAMQETTARKAEAWTTVERLLNSRLQEAEAKAAAAEEKERSVNERLS
QTISRTSVLEAQISILRSEQTQLVRSLEKERQKASENRREYLALKEEVDTREDHVNQLKE
EIRELKRKHKQELHEALTNRELLLQDIEREKAARLELETTIRLQPSILSEPSPLARTKSS
YENGLSHRLSNASSLGSMEESFYLQASLDSSDTFSERRNSGEPTMSSYHLKSMTPNVFEA
ALRQKEGELASYMNRLASLESIRDSLAEELVTMTEECEKLRSEVSLLPGLKADIEALRRR
HSAALELMGERDEELEELRADIVDLKEMYREQVNMLVNKIQVLSSSITAA
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atggcttggtttagtagcaaggtttcgttagggaactttccggatttagctggagcagtt
aacaagttcagtgagagtgttaagaatatagaaaagaatttcgacagcgctcttggactt
gaagacaaggctggtggtactactacttccactacagaagcttcagggtcatggtcttct
gacttgatgtccttcatgggacagaaagctgaagatggaattgttgagtccaaggaaaaa
catgaaccttcaagtcctgaaccttcatctctttcaaaggaaaaagaaggggtacagtat
gattcatcaccggaatctgtagttgaacaccgggaatctgttaaagaagaaaatgtagag
actttgaagcctgaagagcataaggaacaccatgtagaaacaaatattgaggccctggaa
cagggtaacgactctactgaaatacccgcaggaacaatgaatgttgagcttgagaattca
gatgttgctggtaaacccttggaaacaaatgttgcaattacagaagatgcagagaatgtt
gctggaaaatatgcagtaacagatattgtaatatctgaacagaaaattactcccgttgct
aacaatagtgaagctgtagctgaagctgaaattgattcacaagaccaattaagtttgggt
cataatgaccaatcagagtttctggatcttaactcagaaggtggctcactaaagaaatct
gaatcaatacaagacgagcctacagatttccccgaccaagttataggcacttttgagctg
aatgaagtgcaccatgttcctgatttgcagaaggatgagaatgcactaaagatagagtct
gaagagacttcacatgaaatttctgcagctgaagtggtgaaaccctcatatgatggtcaa
gatataaaagtgacagtgttaaatggtgttcagtctgtcacactcgatgtagcaaatgct
gctgaagaaggccaactacacttgtcagaaagctcaaggggcatttctatgatggttcct
gaagtaggttcaaaggaagaaaatgcaaatgctgaagctcatataccaggccagctaatc
agtgaaaatcaaagtgatatcaatgaagaacttgctaactcagaaaacaatttatctcac
agtgcagattcggctcgtgaactagagaaagtgacgagggaaatgaagatgatggagact
gcccttttaggggctgctagacaagcgcaggcaaaagctgatgaaattgcaaaactgatg
aatgagaatgagcaactgaaatctgtaattgaggatcagatgagaaaaccaaatgaagca
gatattgaatctctacgagaagagtatcaccaaagggtctcaagtctagaaagaaaggtt
tatgccctcacaaaagaaagagatacattacgccgagagcaaaataagaaaagtgatgct
gccgctctcctgaaagaaaaggatgaaattatcacccaaattatggcagaaggtgaaggg
ctttcaaagaaacaagcagctcaagaatctcaaattaggaaactgcgagcacagatcagg
gagtttgaagaggagaagaaaggattgatggccaaattacaggtcgaagagagtaaagta
gaaagtataaggagggataaggcagcgacagaaaaattgcttcagttaacgatagaaaaa
aaccaggctgaacttacaacacaaaaagaatactatacaaatgcattggctgcagccaag
gaagcggaagcattagcagaggcacgtgccaacagtgaagccaaaactgaggtcgagagt
cgccttaaagaggccgaggaacgtgaagttatgctagtccaaaccctagaagaattgaga
gaaactttgagcagaactgaacagcaggcggtgtttagagaagatatgcttaagagagat
gttgaggacctccaaaaacgataccaagaaagtgagcgtagatgcgaagtgttggtcatg
gaaattcctgattctactagacctcttttgaggcagatagaagctatgcaggaaacaaca
gctagaaaagcagaagcttggactacagttgagagattactgaattcacggcttcaggaa
gccgaagccaaagctgcagctgcagaggaaaaagaacgctctgtaaatgaacgcctatct
caaacaatatctcgaacaagcgttcttgaagctcagatttcaattttaagatccgagcaa
acacaacttgttaggtctcttgagaaggaaagacagaaagcatctgaaaatcgtcgggag
tatttggcactgaaagaggaggtagatactcgtgaagatcatgtgaatcaactaaaagaa
gagataagggagctcaagaggaagcacaagcaagagctgcatgaagcattaactaatcgg
gaacttctcctgcaggatattgaacgtgagaaagctgcacgtttggaattagaaacaaca
attcgtctacagccttctattctgtctgaaccaagtcccctagctagaaccaagtcatcc
tatgaaaacggcctatctcatagactttcaaatgctagcagtctgggtagcatggaagaa
agtttttatcttcaggcatctttggactcatctgatactttctctgaaagaagaaattct
ggagagccgaccatgagctcgtatcatttaaaaagtatgaccccaaatgtatttgaagct
gcactgcgccaaaaggagggagaacttgcatcttatatgaatagattggcatctttggaa
tccattcgtgactctctagccgaggagttggttacgatgactgaggagtgtgaaaaattg
cggtctgaggtgtctctactccctggcttaaaagcagacatagaagcacttagacggagg
cactctgctgcattggagctgatgggtgaacgagatgaagagcttgaagagcttcgtgct
gatatcgtggacctgaaggaaatgtatagagaacaagtaaacatgcttgtaaataagatc
caggtattaagttcatccataacagctgcctaa
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