Erigeron canadensis (horseweed): 122606939
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Entry
122606939 CDS
T07610
Name
(RefSeq) pleiotropic drug resistance protein 1-like
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122606939
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecad02000
]
122606939
Transporters [BR:
ecad02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
122606939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_16
AAA_29
AAA_28
AAA
AAA_25
AAA_33
nSTAND3
RsgA_GTPase
DnaB_C
DO-GTPase2
Adeno_E3_CR2
AAA_11
DO-GTPase1
Motif
Other DBs
NCBI-GeneID:
122606939
NCBI-ProteinID:
XP_043635770
LinkDB
All DBs
Position
7:complement(308364..321256)
Genome browser
AA seq
1432 aa
AA seq
DB search
MDGGDIYKATSSLRMGSLRAGSGRTSSVRSASNSLWRNSGMDVFSRSSREEDDEEALKWA
ALEKLPTFDRLRKGLLFGSTGPSNEIDIDNLGFEQRKHLLDRLVKVADEDNERFLLKLRN
RLDRVGIELPTIEVRFEHLTVEADVSIGSRALPSFLNFHIDIFEGFLSMFHLRPNNKKHI
TILDDLSGVVKPSRMTLLLGPPSSGKTTLLLALAGKLAKELKNSGRVTYNGHELHEFVPE
RTSAYISQNDVHIGEMTVRETLAFSARCQGVGTRYEMLAELSRREKNANIKPDPDIDVYM
KAAASEGQEASVVTDYTLKLLGLDICADTMVGDQMIRGISGGQRKRVTTGEMIVGPSKVL
LMDEISTGLDSSTTFQIVKSLRQFLHILEGTAVISLLQPAPETYDLFDDIILLTDGKIVY
QGPREDVLEFFESMGFKCPERKGVADFLQEVTSKKDQQQYWMRRDLPYRFVTAKEFSDAF
QSFHVGRNLREDLGTPYDKSKSHPAALTTEKYGLNKKELLKACTDREILLMKRNSFVYIF
KTFQLITTALIALTLFFRTEMHRRGPEDGAIYVGALFFGVCMITFNGMSEISMTIAKLPV
FYKQRDFLFYPSWAYALPSWIVKIPISVIESATWTFLTYYIIGFDPNVGRFFKQFLLFFF
VNQMSSALFRFIGAMGRNMIIANTFGSFALLLIFALGGFVLIREDVKKWWLWGYYTSPLA
YAMNGLSVNEFLGHSWKTPMNDTTLGKIVIASGGFFPQAYWYWIANGALVGFILIYNLCC
ALSLEFLDPFGKSQGHVATDDDTDKGAVELTSTTTGSGGQIKKKGMILPFEPHSITFNDV
KYSVDMPQEMKQQGVSEDRLLLLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG
YIEGDVRISGYPKKQETFARISGYCEQNDIHSPHVTVYESLLYSAWLRLSTDVDEQTRKS
FVDEVMDLVELNPLREALVGLPGINGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR
AAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQELYVGPVGRNSCDLI
KYFEDIHGISKIKDGYNPATWMLEVSTSSQEIALGVDFTEIYRNSDLYRRNKALIAELSV
PRAGTQDLYFPTQYSQSFMVQCLACLWKQRYSYWRNPPYTAVRFVFTTFIGIIFGTMFWD
LGGKMKTQRDLTNAMGSMYAAVLFLAIQNASSVQPVVDIERTVFYRERAAGMYSALPYAL
AQVLVEVPYVMAQTGAYSVIVYAMIGFDWTAAKFLWYCFFQFCSLLYMTYYGMMTVAITP
NANFGAIVAAFFYGIFNVFSGFLIPRPRIPVWWRWYFWGNPLAWSIYGMVASQFGEFEDE
LVNGETVRGYLDRYYGYKHDFLGVVAGVNIGLVILFACIFAYCIRAFNFQKR
NT seq
4299 nt
NT seq
+upstream
nt +downstream
nt
atggatgggggtgacatatataaagctactagtagtttaaggatgggtagtttaagagca
ggaagtggacgaacatcgagtgtacgatcagcgagtaattcgctatggaggaattcgggt
atggatgttttttcaagatcatcaagagaagaagatgatgaagaggctcttaaatgggcc
gcacttgaaaaactgccaacttttgatcgattaaggaaaggtttgttgtttggatcaacc
ggtccttcaaacgaaatcgatatcgataatcttggatttgagcaaaggaaacatttgctt
gatagacttgttaaggtggctgatgaagataatgaaagatttttgttgaagctaaggaac
agacttgacagggttggaattgaattgccaacaattgaagtgagatttgaacatttgacc
gtggaggctgatgttagcataggaagtagggccttgcctagtttcctaaactttcacatt
gatatctttgaggggtttttgagcatgtttcatctacgtccaaataacaagaaacatata
actattcttgatgatcttagtggagttgttaaacctagcagaatgacattattgttgggt
cctccaagttctggaaagacaacactcttgttagcattggctgggaagctcgccaaggag
cttaaaaattccgggagggtgacgtataatggccatgaactgcatgaatttgtacctgaa
agaacttctgcgtatatcagtcaaaatgacgtccatattggagaaatgacagtcagagaa
accttggctttctctgctcgatgccaaggggttggaacacgttacgagatgttggcagag
ttgtcaagaagagagaaaaatgcgaacatcaaacctgatcctgatatcgatgtctacatg
aaggctgcagcaagtgaaggacaagaagcaagtgtagtcacagattatactctcaagtta
ttgggattggatatatgtgctgacaccatggtaggggatcaaatgatacggggtatttct
ggtgggcaaaggaagcgtgtgacaaccggcgaaatgatagttggaccatcaaaggttctt
cttatggacgagatatcaactggtttggatagttcaacaacgttccaaattgtgaaatcg
cttagacagtttcttcacattcttgaaggaactgctgtcatttctctcctacagcctgca
ccagagacctacgatttgtttgatgacatcatccttttaactgacgggaagattgtgtac
caaggtccgcgtgaagatgtacttgagttttttgagtccatggggttcaaatgcccagag
aggaaaggagttgctgactttctgcaagaagttacatcaaagaaagaccagcagcagtat
tggatgagaagagatttgccatatagattcgtgaccgctaaagagttttctgacgctttc
cagtcttttcatgtcggaaggaatctaagagaggatcttgggaccccatatgataaaagc
aaaagtcaccctgctgctctcacaactgaaaaatatggtttaaataaaaaggagctctta
aaggcttgtacggacagagaaatattgctaatgaagaggaactcattcgtttatatcttc
aaaacgttccaactaattacgacagcactcatcgccttgactttgtttttccgaactgag
atgcatagacgtggtcctgaagatggtgcaatatatgtcggtgctcttttctttggtgtg
tgtatgattacatttaacggaatgtctgagatctcgatgacaattgcaaagcttcctgta
ttttacaaacaaagagattttctcttttatccctcgtgggcatatgctcttccatcgtgg
atcgtcaagattccaatttcagttattgaatctgctacttggacatttttgacctattac
ataataggattcgatcctaacgtgggaagattcttcaagcagtttcttctgttctttttt
gttaaccagatgtcttctgcattatttcggttcattggagccatgggtcgaaatatgata
attgcaaacacatttggttcatttgcacttctcttgatttttgctttgggtggctttgtc
cttattagagaggatgtaaagaagtggtggttgtggggatactatacatctccgctagca
tatgccatgaacggacttagtgtgaacgagtttcttggacatagttggaaaacgccaatg
aatgacaccacgctcgggaaaatcgttatagcatctggaggattttttccacaagcttac
tggtattggattgcaaatggggctttggttggatttattcttatctacaacttgtgttgt
gctttgtctctcgaattccttgatccttttgggaaatctcagggtcatgtagcaacagat
gatgacactgataagggagccgttgaattgacatccacaacaacaggtagtggcggtcag
atcaagaagaaagggatgattcttccatttgaaccacattcaattacctttaatgatgtc
aaatactcggtcgatatgccacaggaaatgaaacagcaaggggtgagtgaagacagatta
ctactgcttaagggtgtgagcggagcttttcgaccaggagttcttacagctcttatgggg
gtgagtggtgcaggaaaaactactctgatggatgtgttggcaggtagaaaaacaggtggt
tatatagaaggtgacgttaggatttccgggtatcccaagaaacaagaaacctttgctagg
atttctggatactgtgagcaaaatgacatccactcgcctcatgttaccgtgtacgagtct
ttgctttactcggcctggttaaggctttctacggacgttgacgaacaaaccagaaagagt
tttgttgatgaggttatggatcttgtggaactgaacccattaagagaggcattagttggg
ttaccaggtatcaacggactgtctacagaacaacgcaagaggttgaccatagccgtggag
cttgtagccaatccatccataatcttcatggatgagccaacttcagggcttgatgctcga
gctgctgctattgtaatgagaacggttcggaacactgtggacactggaagaacagttgta
tgcaccattcatcaacctagtattgatatctttgaagcttttgatgagttgttcttgatg
aaacgaggagggcaagagttgtatgttggacctgttggtcgcaattcctgcgatctgatc
aagtattttgaggatattcatgggataagtaagatcaaagacggatacaaccctgcaaca
tggatgttggaagttagtacgtcgtcgcaagaaattgctttaggggtagatttcactgaa
atctacaggaattcagatctttacaggagaaacaaagcactgattgctgaactgagtgta
ccacgtgctggcacgcaagatctctatttcccgacacaatactcacaatcatttatggta
caatgcttagcttgcctatggaaacaacgttattcatattggagaaaccctccatacaca
gcagtccgttttgtcttcaccaccttcatcggcattatctttggtactatgttttgggat
ctcggtggtaaaatgaaaacccaacgtgatttgaccaatgcaatggggtcaatgtatgct
gcagtcctctttctcgctatccaaaacgcatcatcagtgcagccagttgtggatatagaa
cgcaccgtgttttatagagaacgggctgcaggaatgtattctgctttgccatatgctttg
gctcaggttctagtcgaagttccttacgttatggcccaaactggagcatatagtgtaata
gtttatgctatgatcgggtttgattggacagcagccaagttcctatggtactgtttcttc
cagttctgctctctactctacatgacatattatggcatgatgaccgtcgccattacacca
aatgccaactttggcgccattgttgctgcctttttctatggaattttcaacgtcttttca
ggattccttatcccacgacccagaattccagtttggtggagatggtacttctggggaaac
cctctagcttggagcatttacggcatggttgcatcacagtttggggaattcgaagatgag
ctagtgaatggagagaccgttagaggttacttggatcggtattatggttacaaacatgat
ttccttggcgttgtcgctggagttaatatcggcctagttatactttttgcatgtatattt
gcatattgcattagagccttcaatttccagaagagatag
DBGET
integrated database retrieval system
