Erigeron canadensis (horseweed): 122606983
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Entry
122606983 CDS
T07610
Name
(RefSeq) transcription initiation factor TFIID subunit 12
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122606983
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecad03021
]
122606983
03036 Chromosome and associated proteins [BR:
ecad03036
]
122606983
Transcription machinery [BR:
ecad03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
122606983
Coactivators
SAGA/TFTC/STAGA complex
122606983
Chromosome and associated proteins [BR:
ecad03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
122606983
STAGA complex
122606983
TFTC complex
122606983
SAGA complex
122606983
SLIK complex
122606983
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
Histone
Motif
Other DBs
NCBI-GeneID:
122606983
NCBI-ProteinID:
XP_043635835
LinkDB
All DBs
Position
1:52912858..52917063
Genome browser
AA seq
518 aa
AA seq
DB search
MEPPPSSETPPPPSPQIITTTPPPTTTPSTEQPPTEPQPQPLPTTSSSPTLQQPPPLTPN
PNPKPPNPSIPQTQPQPQLPVPITRPPFNRPPWAPQNQPSPPFTHFSSISNHSTAPSSLS
SPRGGMAIGVPASSSFGPNPQPPSSFSSLAPPFGTSASQVRPSMPGMQGMLGSGGSSLRP
GGVTTSSHPQRPIPPSLRPQTGPNSPSPAPQNFQEHGLLRLPSAGSPGSPAPITPQSSQS
HNQPWLSSGSQGKPPLPPASSFRPQMNPQSLQQRSNIPSQQQTAMSVATQQPQTSSSLQS
QPPSLSQQSQDHYSLPPSRVPQSLSHQQQMARNRGLGNQRPFSPPVGPSSSVAPPPAVNR
PLAVVEPSEPCNRIISKRSIQEIVAQIDPSERLDPEVEDILVDIADEFVDSVTTFACSLA
KHRKSSTLESKDILLHLERNWNMSLPGFGGDEIKVYKKPFGNDVHRERLAAIKRSIAVSE
TPNVKISGGQTGGGAKAHPAKAPGLLIGSPNPKGREAT
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggaaccaccaccatcttccgaaacaccaccaccaccatcaccacaaataatcaccaca
actccgccaccaaccaccaccccatccaccgaacagccgcccacagaaccccaaccccaa
ccactccccaccacctcatcatctcccacattacaacaaccaccaccactaactccaaac
cctaaccctaaacccccaaatccatcaatccctcaaacccaaccccaaccccaattacca
gtgccaataacaagaccaccatttaaccggcctccatgggccccacaaaaccaaccatct
ccccctttcactcatttctcttccatctccaaccactctactgccccttcttcattatcc
tcccctcgaggcggtatggctatcggtgtacccgcctcgtcttctttcggaccaaaccct
caacccccctcttcgttttcgtccttagccccgcctttcggtacctccgcttcacaggta
aggccatcaatgcctgggatgcagggaatgcttggttcgggtggttcttctttacgtcca
ggtggagttactacatcatcgcatccgcagaggcctatcccgccttccctgagaccgcag
acgggtcctaatagcccctcgcccgctccacaaaatttccaagagcatggacttttaaga
cttccgtcagctggatccccaggctcaccagcacctataactccacagagctcacagtct
cataatcaaccgtggctatcatctggttcacaaggaaagccgcctcttcccccggcatca
tcattcagaccccaaatgaaccctcaatcattgcaacagagatcaaatataccatctcaa
caacaaactgcaatgtctgtagccacacagcagcctcaaacatcctcatcactgcaatca
caaccaccttcgttgtcacaacagtcacaggatcattactcgttaccaccatcacgggtc
ccacaaagtttgagccatcaacaacagatggcaaggaatcgtgggttggggaaccaaaga
ccattctctccacctgttggaccatctagctcagtcgcaccaccacctgcagtgaataga
ccactagctgttgtggagcctagcgagccttgtaacaggattataagcaagagaagcatc
caggagatagttgctcagattgatccctctgaacgattggatccagaagtggaagacatt
ctggttgatatcgctgacgaatttgttgattctgttacaacctttgcttgctcgttagcc
aagcatcggaaatcaagtacgctagagtcaaaagacattcttctacaccttgaaagaaac
tggaacatgagtcttcctgggtttggtggagatgaaatcaaggtttacaagaaaccattt
ggtaatgatgttcatcgagagcgtttggccgcgataaagaggtcgattgctgtttctgag
acgccaaatgtgaagatttcaggtggacagactggtggtggtgctaaagctcatccagca
aaagcacctggtcttcttattggttcccccaaccccaagggtcgtgaagctacatag
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