Erigeron canadensis (horseweed): 122607049
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Entry
122607049 CDS
T07610
Name
(RefSeq) dehydrodolichyl diphosphate synthase CPT3-like
KO
K11778
ditrans,polycis-polyprenyl diphosphate synthase [EC:
2.5.1.87
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00900
Terpenoid backbone biosynthesis
ecad01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
122607049
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ecad01006
]
122607049
Enzymes [BR:
ecad01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.87 ditrans,polycis-polyprenyl diphosphate synthase [(2E,6E)-farnesyl diphosphate specific]
122607049
Prenyltransferases [BR:
ecad01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
122607049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prenyltransf
Thg1
Motif
Other DBs
NCBI-GeneID:
122607049
NCBI-ProteinID:
XP_043635909
LinkDB
All DBs
Position
1:complement(42088615..42090383)
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AA seq
272 aa
AA seq
DB search
MDAKQRSKVYENLGSFARKCVFCILSVAALPNHIAFIMDGNRRYSKQHNLIDGGGHRVGF
SSLMSMLRYCYELGVKYVTIYAFSIENFKRSPEEVQSLMDLMEEKIKGLVKEESLVNQYG
VRVYFIGNLELLSQPVRLAAERAMDATAKNSKAVLSICIAYTSSDEILHAVQESCDEKWD
DNKVSSDTKQEKNIIDVLDIERHMYMSVVPDPDIIIRTSGETRLSNFLLWQSTNCLLYSP
SVLWPEIGFRHLVRAILDFQYHLYYLSKQKQT
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggatgctaaacaaagaagtaaagtatatgagaatttaggtagttttgcaaggaaatgt
gttttttgcattctttctgtagctgcattacctaatcacattgcttttattatggatggt
aatagaagatactctaagcagcataatttgattgatggtgggggacacagggttggattt
tcttcattaatgtcaatgcttagatattgttatgagttgggggtaaagtatgtgacgatt
tatgcgtttagcatagaaaattttaaaagaagtcctgaagaagtgcaatctttaatggac
ttgatggaggaaaagatcaaagggttggtaaaagaagagagtttggttaaccagtatgga
gttcgggtttactttattggaaaccttgaattattaagccaacctgtaaggttggctgca
gaaagggctatggatgcaactgcaaagaactcaaaagctgttctttcaatatgtattgca
tatacttccagtgatgagattttgcatgctgttcaagaatcttgtgatgaaaaatgggat
gataataaagtatcgagtgatacaaaacaggaaaagaatatcattgatgtgttagatatt
gaaaggcatatgtacatgtcagtcgtacctgaccctgatattataatccgtacatctggt
gagacccgtttgagcaattttcttttgtggcagagcactaactgtctcttgtattcacca
tctgttttgtggcctgagattggtttccggcacctggttcgggcaatcttggacttccag
tatcatttatattatttaagcaaacagaagcagacatga
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