KEGG   Erigeron canadensis (horseweed): 122607088
Entry
122607088         CDS       T07610                                 
Name
(RefSeq) ras-related protein Rab7-like
  KO
K07897  Ras-related protein Rab-7A
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad04144  Endocytosis
ecad04145  Phagosome
ecad04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    122607088
   04145 Phagosome
    122607088
   04148 Efferocytosis
    122607088
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ecad04131]
    122607088
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ecad04147]
    122607088
   04031 GTP-binding proteins [BR:ecad04031]
    122607088
Membrane trafficking [BR:ecad04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    122607088
Exosome [BR:ecad04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   122607088
  Exosomal proteins of other body fluids (saliva and urine)
   122607088
  Exosomal proteins of colorectal cancer cells
   122607088
  Exosomal proteins of bladder cancer cells
   122607088
GTP-binding proteins [BR:ecad04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    122607088
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA ATP_bind_1 cobW RsgA_GTPase AAA_16 nSTAND3 Septin AAA_7 AAA_24 AAA_22 PduV-EutP DAP3 NACHT nSTAND1 ATPase_2 Sigma54_activat AAA_5
Other DBs
NCBI-GeneID: 122607088
NCBI-ProteinID: XP_043635941
LinkDB
Position
7:complement(21633243..21639049)
AA seq 205 aa
MSFRRRTLLKVIVLGDSGVGKTSLMNQYVHKRFSQQYKATIGADFVTKELQIDDKIVTLQ
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMRSFDTLDTWHEEFLKQANPADLGSFPF
ILLGNKIDIDGGNSRVVSEKKAMEWCSSKGNIPYYETSAKEDHNVDDAFLCIAKSAMANE
HEQDLYFQGVPDAVTETDQRGGCSC
NT seq 618 nt   +upstreamnt  +downstreamnt
atgtctttccgtagacgcacgttgctcaaggtcattgtcctcggcgacagcggggttgga
aaaacgtcattgatgaatcaatatgtacataaaagatttagtcaacagtataaagctact
attggagctgattttgtgactaaggagttgcagatagatgacaagattgttacactgcaa
atttgggacactgctggccaggagagatttcaaagtcttggtgttgcattttatagagga
gctgattgctgtgttttagtgtatgatgtaaatgtaatgcgatcttttgacacacttgac
acatggcatgaggaatttttaaaacaggcaaatcctgccgatcttggttcttttccgttc
atattgcttggcaacaagatcgacatagatggtggaaatagccgagtggtttctgagaag
aaagcaatggagtggtgtagctcaaaaggaaacataccttactatgagacatctgcaaag
gaagatcacaatgtggatgatgcatttctgtgtattgccaaaagtgcaatggcaaacgag
catgaacaggatctgtacttccagggagttcccgatgctgtaacagaaacagatcaacgt
ggtggctgttcatgctaa

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