Erigeron canadensis (horseweed): 122607154
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Entry
122607154 CDS
T07610
Name
(RefSeq) protein argonaute MEL1-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122607154
03036 Chromosome and associated proteins [BR:
ecad03036
]
122607154
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
122607154
Chromosome and associated proteins [BR:
ecad03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
122607154
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
122607154
microRNA pathway
RISC loading complex
122607154
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoMid
ArgoL2
PAZ
Motif
Other DBs
NCBI-GeneID:
122607154
NCBI-ProteinID:
XP_043636017
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All DBs
Position
1:8700341..8706301
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AA seq
603 aa
AA seq
DB search
MGMSLNLQMSARAYYQPTLVYDFTREFLGRDTSGPLSAGEHRKVAKAVKGLKVEVDGENY
TRKFNVLGLTTEPLGDLRFVESYTPLNLNFPAILIGTAISPKYIPMELCRIAPGQSYPLT
NRKQADRFHMYACDPPLHRKNNICMTVRDNKYNINSLVRVTEQMTTIDARVLPPPAITYY
SSVEGLKDFIPVNGQWTLTDKNFVNAGTVNRWGIANFSRRNIYGIGYFCGKVVQMCRKMG
MVFNPIPMFQRSYPPVDIAKILKDIKAEYHHLDLLFVILPDDKEVYAIIKRVCETDIGVI
TQCFRHRNVEEVTNDYLEHVALKINVKVGGRNTFLSAAHNRTLRYVSEVFTIIMGADVTH
PIPGDRSSPSIAAVVASMDWPELTRYRAMFSAQSNGMEIIQDERLIREQLLSFYQTHGKP
ERIIYYRDGVGDSQFRRLLDSELGLIRKACESLAENYRPNVTFIVMIKRHNTRLFPSLDH
DSSGNVLPGTVVDTQICNPTDFNFFLCSHAGIKGTSRPAHYYLLHDENGFTADGLERLTY
DLCYICVRGTRSISIVAPVYYADLAAYRARCYIEGDRAERQVADELIELPAIHEDLRNVM
FYC
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgggcatgtccctcaatttgcagatgtctgccagggcttattatcagcccacgttagtc
tacgattttactagagagtttctcgggagagatacatcagggccactttcagccggagaa
catcgtaaggtcgcaaaagctgtcaaaggccttaaggtggaagttgatggtgagaattac
accagaaagtttaatgttctagggttgaccacagaaccgcttggagacctaaggtttgtt
gaaagctacacaccgctgaatctaaattttcctgccatattaatcgggactgcaatatcg
cccaaatatattccaatggagctttgcagaatagctcctgggcaaagttatcctctgacc
aatcgaaagcaagcggacagatttcatatgtacgcatgcgaccccccgttgcacagaaaa
aataacatatgcatgacggttagagataataagtacaatatcaatagtttggtgagagtg
actgaacagatgacaactatagatgcacgggttcttccaccacccgctatcacctattat
tcttcagtggaaggcttgaaagactttatcccagtcaacggtcaatggacgttgactgat
aagaacttcgtgaatgctggaacggttaatcgttggggcattgccaacttctcccgaaga
aatatctatggtataggctacttttgtggtaaagtcgttcagatgtgcaggaagatggga
atggtatttaatcccatacccatgttccaaagatcttatccgcctgtcgacattgccaag
attctaaaggatatcaaggctgagtaccaccatctagaccttttatttgtgatacttccg
gacgacaaagaagtatacgctatcattaaacgagtctgcgaaacggatattggggtaatc
acccagtgttttagacatagaaatgtggaagaagtcacaaatgactatcttgagcacgtg
gctttgaagattaatgttaaggtggggggcaggaatacttttttgtctgcagctcacaat
agaaccctccgatatgttagtgaagtttttaccataattatgggggctgatgtaacacac
ccaataccaggagacagatccagcccttcgattgctgctgtggtagcatctatggactgg
cccgaactaacgaggtacagagccatgttctctgcacagtcgaatgggatggaaataatt
caggatgaacgtttaataagggagcaattgctatccttttaccaaacacatggaaaacct
gaaagaattatatactatagagacggagttggtgatagccagtttagacggctcctagac
agcgaactgggcctcatccgcaaggcttgtgaatccttggccgagaattatagacctaat
gtgacttttatagtcatgataaaacgacacaatactcgcctctttccttcgttggatcat
gatagcagtggcaatgttcttcctggtactgtggttgatacgcaaatctgtaacccgact
gatttcaacttctttctatgcagtcatgctggtattaagggaacgagtcggcccgcccac
tactatcttcttcatgatgagaatggattcactgctgatgggttggaaaggcttacatat
gatttgtgctatatatgtgtaaggggtacccgatcgatttcaattgtcgccccggtgtat
tatgcagatttagctgcgtatcgtgctcgctgctacattgaaggagatcgtgctgaaagg
caagtggctgatgaattaatagagttaccagcgattcatgaagatctcagaaatgtgatg
ttctactgttag
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