Erigeron canadensis (horseweed): 122607161
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Entry
122607161 CDS
T07610
Name
(RefSeq) B3 domain-containing transcription repressor VAL2 isoform X1
KO
K09287
RAV-like factor
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecad03000
]
122607161
Transcription factors [BR:
ecad03000
]
Eukaryotic type
Other transcription factors
AP2/ERF
122607161
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
B3
zf-CW
Hydrolase_6
FrhB_FdhB_N
Motif
Other DBs
NCBI-GeneID:
122607161
NCBI-ProteinID:
XP_043636021
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Position
7:37881840..37888365
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AA seq
802 aa
AA seq
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MECRSSSISICMNELCGAQLISVEHKKGWILRSGDFAKLCFNCGTAYERLAFCELFHLED
TGWRECTLCNKRLHCGCIASSAFIELLENGGVKCVICSNNSIRDHSTSEDKLAECGVSAE
NSVGEVRSSSTKMLKQSCDDDASTSQTKHEECLPRVGEIQNNSTTISTFDGTSDYRESTG
AKDVYGSAVQTDLTIGLASSSQKPIFVPNAVGPWSRHILPKVPKSNPPQRFDPNAGVGSQ
IRVARPPVEGRIKNQLLPRYWPRITEQELQQISGDSNATIVPLFEKILSASDAGRIGRLV
LPKACAEAYFPPISQPEGLPLRIQDVKGKEWLFQFRFWPNNNSRMYVLEGVTPCIQSMQL
KAGDTVTFSRMEPEGKLLMGSRKATVSTSIQDPRISAMHNGVATIENLSNMSDYSNLLQS
LKRNTDSHLNSLSRNMNLTIGDANWHANEMHGNGNKSRIDSSFQPDKKRSRNISSKSKRL
HIESQDALDLKYTWEELQDMLTPPANMQPSTVIIEDNEFEEYEEPPIFGKGSIFTVRLSG
ELDQWAQCDNCSKWRRLPADFLLPAKWTCQENVWDQSRAACLAPDELNPRELEHLLGMAK
EFHKWRNSLSHGIDQEQGTSGANQTEPSIAATTKHPRHRPGCSCIVCSQPPSGKGKHKPN
CSCNVCMTVKRRFKTLMLRKQQRQSEREAEIAEKNQLKLGPNNEMEVRESRSSGKGQLDL
NIHPIRVQDNLAASTAPVSMMSLLQAANQPLETYMKQNGLTSLVSEQQASSGSQALPQAS
SGCTLMVQEDDPQEPDLNDNSS
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggagtgtagatcatcatcaatttcaatatgtatgaatgaattatgtggagctcaatta
atatcagttgaacataaaaaaggttggattttgcgatctggtgattttgctaaactttgt
tttaactgcggtactgcgtatgaacgactagcattctgtgaattattccacctagaggac
actggttggagggagtgcactttatgtaacaagcgactccattgtggatgtattgcttct
agtgctttcattgaactattagaaaacggtggtgtaaagtgtgtcatttgctcaaataat
tcgatacgtgatcatagcactagtgaggataagcttgcagaatgtggtgtttcagctgaa
aatagtgttggagaagtacgatcctcttctactaaaatgttgaaacaatcatgtgatgat
gatgcatctacaagtcaaacgaaacatgaagaatgcttaccgcgtgtaggagaaattcaa
aacaattcaacaacaatttcaacatttgatggaacttctgattatagagaaagtacaggt
gctaaagatgtatatggatcagctgtacaaaccgacttaactatcggtttggcttcttct
tcacaaaaacccattttcgttcccaatgcggttgggccttggtctcgtcatatcttgccc
aaagtgcccaaatccaatcctccccaaaggtttgatccaaatgctggtgtgggttcacag
atacgggttgcacggccacctgttgagggacggatcaaaaatcagctacttcctcggtat
tggcccaggatcacagaacaagagctacagcagatatctggagactcaaatgccaccatt
gttccactttttgaaaagatcctgagtgctagcgatgcaggtcgaataggtcgtttggtt
ctcccaaaagcatgtgccgaagcatattttccacctatatctcaacctgagggactccca
ctgagaattcaagatgtaaaaggcaaagaatggctgtttcagttcaggttttggccaaat
aacaacagccggatgtatgttcttgaaggtgtcacaccatgcatacaatctatgcagtta
aaggctggggatactgtgaccttcagccgtatggaacccgaaggaaagcttcttatgggc
tccaggaaagccacagttagtacctctattcaggatcctcgtatatctgcaatgcataat
ggtgttgctactattgagaatctttcaaatatgagtgattactcaaaccttctccagtca
ctaaagagaaacacagattcccatctaaattcgttatcaaggaatatgaacttgaccatt
ggagatgccaactggcatgcaaatgaaatgcacggaaatggaaacaagtcaaggattgat
tcttcatttcaacccgacaaaaaaagaagtcggaacatcagttcaaaaagtaaaaggttg
catattgaaagtcaagatgcgttggacctgaagtatacatgggaagaattacaggatatg
ttgacaccacccgctaatatgcagccaagtactgtcatcatcgaggacaatgaatttgaa
gaatacgaagaacctcctattttcggtaaggggagtatattcactgtccggttatctggg
gagctagaccagtgggcgcaatgtgataactgttcaaaatggcgaaggttacctgctgat
ttccttctccctgctaaatggacatgccaagaaaatgtgtgggatcagagcagggccgcc
tgtcttgcaccagatgaactgaaccctagagaactcgagcaccttcttgggatggctaaa
gaatttcataagtggaggaattctttgagccatggaatagaccaagagcagggaacaagt
ggagccaatcagacagagccatcaattgcagctaccaccaaacacccaaggcaccgccct
ggctgctcctgtatagtctgcagtcaaccacctagtggcaaaggtaaacacaagcctaat
tgcagttgcaatgtctgcatgacagtcaaacgccgattcaaaaccctgatgttacgcaaa
caacaacgccaatcagagcgtgaagcagaaattgcagaaaaaaatcagctaaaattaggc
ccaaataatgagatggaagtcagagagtctagatcatcaggcaagggacaattagacttg
aacattcatcctattcgtgtacaagacaatcttgcagcaagtacagcccctgtaagcatg
atgagtcttctccaagcagcaaatcaaccactggagacatatatgaagcaaaacggtcta
acaagcttagtctctgagcaacaagctagctcaggttcacaagcattgccacaagctagc
tccggttgtacacttatggttcaggaggacgatccccaagaacctgaccttaatgataac
agttcgtaa
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