Erigeron canadensis (horseweed): 122607234
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Entry
122607234 CDS
T07610
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1-like
KO
K13103
tuftelin-interacting protein 11
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ecad03041
]
122607234
Spliceosome [BR:
ecad03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
122607234
Other components
Complex C specific factors
122607234
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
G-patch
TIP_N
G-patch_2
Motif
Other DBs
NCBI-GeneID:
122607234
NCBI-ProteinID:
XP_043636104
LinkDB
All DBs
Position
7:complement(36154673..36158025)
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AA seq
729 aa
AA seq
DB search
MVYEDGQSSDRKRKEKSLPQSKDDAIYGVFAYSNSDSDSEGRGSKKKQRRDLSGKQDYTK
PLNFVTPSQEENAKDNGSPSGLDIDRVQEEEANSKIVESFLKEFDKALKEGELQIMEKLK
LKRESCEVAGPGTREGNSVGMKMLEKMGYKGGGLGKNEQGIVEPIEAQIRPKKMGLGFNE
AANYGQKLLKENNVLPPQPTEVQPKWSKQGRSEKKKKEYVTAEELLVNKPRLVEKLIDMR
GPQVRVLTSLENLNDEVKPEEKDDILPELQHNVTLIVNLGELDVQKIDRYLRNERETVVS
LQQQKAKLEDNTARQAKQLDSMEEILTVLDQLDKESRLGTLTLDSLIKSFGNLQKRFSDE
YRVRSLSRVACSYALPLFSRLFQGWDPLIKPMDNLDVISLWKEFLQADERSDSPYPGLFM
KVMFPHIWKSITKTWQVKHPEPLLRFLNIWERLLPHSALKTILDDIVLPNLSAAVDSWNP
RWDTIPIHIWVHPWLAWKSVFDLTSWEHLIRRSITPKLLAVMHEFRVNILDPSDKNLDKF
NWVQTWAGVIPIHYMVRIMDAFFDKWQDVLYQWLSSKPSIEEVMNWYQRWMDVIPPKLLS
NEHIQVRLKVGLCMIKQASEGLQVVQPGFIENQRHYQAQQKAAASFDTSYMGVMSLKEVI
EEHAQHNDVLFKPKPGRMQDGHQVYGFGNVNIIIDSLKEKVFAQTEGKWSLTTLEQLVKM
EKNCVLSRC
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggtttatgaagatggtcaatcttccgacagaaagcgcaaggaaaaaagtcttccgcag
agcaaagatgatgcgatatatggtgtttttgcttatagtaattctgacagtgactctgaa
ggtcgaggcagcaagaaaaaacagaggagagatttgtctggaaaacaggattatactaag
ccattaaattttgttacgccaagtcaagaggagaatgctaaagataatggtagcccttct
ggtctggatatcgacagggttcaagaggaggaggctaatagcaaaatcgttgaatcattt
cttaaagaatttgataaagccctgaaagaaggtgagcttcagataatggagaaattaaag
ttaaaaagggagtcttgtgaagtagcaggaccaggaacgagagaaggaaacagtgttggt
atgaaaatgcttgagaagatgggatataaaggaggcgggttagggaagaatgaacaaggt
attgttgagccaattgaagctcagatacgtccgaagaaaatggggttgggtttcaatgag
gcggctaattatgggcagaaattgttaaaggagaataatgttttgccacctcagcctact
gaggttcaaccaaaatggtcgaagcaagggcggtcagaaaagaagaaaaaagaatatgtt
actgcagaggagttactggtcaataagccccgtttggttgagaaactgattgatatgaga
ggaccacaagttcgggtgttgacaagtttggagaatttgaatgatgaagtgaaaccagag
gagaaggatgatattttgccagaacttcaacataatgtgacattaattgttaatttggga
gagcttgatgtacagaaaattgatcggtacttgagaaacgaaagggagacggtagtcagt
ttgcaacaacagaaagctaagcttgaagataacactgcacgtcaagcaaaacagcttgat
agtatggaagagattcttactgtgttggaccagttggataaagagagccgtttgggaacg
ttgacacttgactcgcttattaagtcatttggtaacttgcagaaacggttttctgatgag
tacagagtacgcagtttgtctagagtagcttgctcttatgctttacctttgttctctaga
ctatttcaaggatgggatccactcataaagccaatggacaatttggatgttatatcatta
tggaaagagtttttgcaagccgacgagcgatctgattcaccttacccagggcttttcatg
aaagtcatgttccctcatatatggaaatcaatcaccaaaacttggcaagtcaagcaccct
gaaccattgttgcggtttcttaatatttgggaacgattactgcctcactcagctcttaag
actattcttgatgacattgtcttaccaaacttatcggctgctgttgactcatggaaccca
cgttgggataccatccctatacatatatgggttcatccatggttagcttggaagtctgtt
tttgatctgacaagctgggaacatttaattcgtcgatctattactcctaagctgttggct
gttatgcatgaattccgagtcaatatactagatccatctgataagaatcttgataagttc
aactgggtacagacatgggctggggtcattcccattcattacatggttcgcataatggat
gcgtttttcgacaagtggcaagacgttctttatcaatggttatcttcgaaaccgagcatt
gaagaggtgatgaattggtatcagcgttggatggatgttatcccacctaagcttttatcc
aatgaacatatacaggttcggcttaaagttggtctgtgcatgatcaaacaggcttctgaa
gggttgcaggtggtccaacccggttttatagaaaaccaaagacattatcaagctcaacag
aaggcggctgcaagttttgatacatcgtatatgggcgttatgagtttgaaagaagttatt
gaagagcatgcacagcataacgatgtgttatttaagcccaaaccgggcagaatgcaagat
ggtcatcaagtgtatggatttgggaacgtcaatataatcatcgactctctcaaagaaaag
gtgtttgctcaaactgaaggtaaatggtcgcttacaaccctcgagcaactggtaaagatg
gaaaagaattgcgttctgagtagatgctga
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